LOCUS LJ662251 985 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69269.graph_c0_seq1.
ACCESSION LJ662251
VERSION LJ662251.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 985)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..985
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69269.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 306 a 181 c 194 g 304 t
ORIGIN
1 atacatgggg agtctcagta tgctcaaacc gtcactatga tttcttttac cggtcttata
61 attgcgtgtg tgatctatca aagcgcctat ggtttgccag atacgcaaat catcggtggc
121 agcaatgctc cggatggcat atatacttac caagcgtcat tgagacgtac gaatactaaa
181 agccattttt gtggtggagc tatccttagt aagagatatg ttatcaccgc ggcgcactgc
241 cttacaaatt tggacggtcc aaaggatgtt ctggtcgctg ttggaagtac taatctttat
301 gcgaataatg ctatatatga agcggaagcc ttaataacat atcctgatta cgtacccata
361 gtaaaaccca accactcttt acatgacatt ggtttaatta aactaaagaa agacatcgct
421 ttcaattcaa atactaatgc gataaagtta ataacttaca atcgagattt tagtggttat
481 aagtttacag tcactggctg gggagagata gcgcctaact ggagtccaat gtacttgcaa
541 catattaatg tgacgggatt gaatcaaaca aagtgcggta ctttttataa taatatcact
601 gacggtcaca tatgcaccca agaagcatat ggtaaaggaa tgtgccatgg tgattccggt
661 ggtccactcg tctacgaaaa acgtctagtt ggcctcgtat cctttggtgt accatgtgct
721 caaggttttc cagatgtgta caccagggtg taccattaca catcatggat taataaaaat
781 gttaatgcag gcagtaacca acaattgaac atcattcttg gactgtttct gacgtatctg
841 agtatacatt catttttata aatgcgcata ttatttattg cgcgcatctg tgatcaatca
901 attttaatta ttaatgaatt tcaattatgg catgacggag aatacttaag aaacaattgt
961 attgttgcta ataataaatt ataat
//