LOCUS LJ662186 2406 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69414.graph_c0_seq1.
ACCESSION LJ662186
VERSION LJ662186.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2406)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2406
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69414.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 758 a 395 c 467 g 786 t
ORIGIN
1 ggtcgacgta ttcaagatgg cgaacacggt gaacgaagtt atggcacagg cgaacgaaaa
61 cttaacggaa taccaaaatg taaatgcaac gagaacgccg tcgacgcccg aaggaatggc
121 gattgcgtac ggtagcctca ttattatggc gattctgcca attttccttg gtagctatcg
181 tgcagtcaaa caccataagg aacagcagca attgtataaa actagtggcg agcaacctga
241 cacgatgtct cgcagagaag ctgccatgtt tcctctcatc tccagtatta ctttagttgg
301 attgtatata ctatataagg tatttgcgaa agagtacgtt aatctgatat tggctggata
361 tttcttcttt ctcggtattc tagctttgtg tcatcttacg agcccattga tttcgtcgtt
421 ggtacctgct gcgattccaa aaacgcagta tcatatttta tttacgcaag gaaaggacga
481 taaagaggaa catataatta actacaagtt taatcttcat gacattgtgt gtctcgtgtg
541 ctgctcgctc gtgggtgcct ggtatcttct gaaaaaacac tggatagcca acaatctgtt
601 tggcatagcg tttgctatta acggagtcga attgttacat ctcaccaatg ttgtgactgg
661 atgcatatta ctttgcggtc ttctgtttta tgatgcattt tgggtgtttg gaacggatgt
721 aatggtgacg gtcgcaaagt ctttcgaagt acccattaag ctcgtatttc cacaagatct
781 tttggaaaag ggcttgaacg ctggtaattt tgccatgttg ggattaggtg acatcgtatt
841 gcctggtatc tttatcgcgt tgcttttgcg attcgacaat agtttgagca ggaaaaccaa
901 cgtctacttc tattcgacat tttttgcata ctttatggga ttactcgcca ccataacgat
961 catgcactta tttaatcacg cacaacctgc tctgctatat ttagtacctg cgtgtatagg
1021 tacgccattg ctcttggcgt tagtcaaggg agacctcaaa gcactgtttt cgtacgagga
1081 tcatccgtca ccacctgcga atgtggcgca acattcggaa caaacgcaag tagaagcgaa
1141 aaaagaaaaa taatatcttg atttactata aagagcatac cgatttgcga aattatcttg
1201 taattatctt tcgaatttat tgtgcgtatg tggtaaaaga aaaacgagta atagtcgatg
1261 gttcgagctc aaaacataca atcgtgcatt gtcaagtata atatcttgta attatatgtt
1321 gcatatacgt gaatcgcaag atatatcggg gtatgaaacg attcgcaatg aacaacgttc
1381 gcgaatatcg cttcgatctg aacgggaaga atccagaacg taagatttag gaatgtgata
1441 accaagagcg ccgtttcatt tgcatgcgaa agaaacggtc tttgtatcac tcgtgtatga
1501 tatcgacgat cgacgtttcg ggatagtgtt ggaaaaaaag cactgttgtc cggaaaaatg
1561 ttaaatgatg aaacagaatt tcattgtgtc gttacttcac aggcttgaga cggaaagaga
1621 gtatgaaaaa gagaaaatgg aataaaaata cttccaattg ctgatttata tttcgtacgc
1681 agtacgtatg agactgcttt aagacgagtt tacctaagtt ttgcgatatg ttacaatttg
1741 cggtgcgttg tataattcta aaatttaatt tgatacaagt ttcaattcca gttccagtta
1801 tctataagtt tttataaata ttccagaatt tttgacaact tttttaccat gtgtgaatgg
1861 taatcgtgaa ttatgaatgt aaaagtaatt ttgtttcctt gtgacgcatt aaacgaatta
1921 atattaagta tattagtaag aaattatttc ctatgataaa attattataa cgagatatta
1981 aacatgtacc tttgtagtac acaaacacta tatatgtata tccgataatt atccatttct
2041 cacaaaaatt ttatatatat gtatatagta taatatatat gtataaaatt tgtgagatgg
2101 atatttatcg aatttattaa aatgaatata aatgttttgt ccagagaaat ataatgtata
2161 tacaaattaa aaatctgtta aagttgcaca attctttttt attcgcgaaa aaatttgaag
2221 gaaaattgta actctaataa gaataaaaga ggtattctcg ctttttattc actgttagaa
2281 attgcttata aacaatatta ttacaatgtt ctaaaatttt tgtattccga cattctcctg
2341 tttgacacaa tttttcctgt ttgtataaat gtttcactat taaaatccta ggcaaaaaat
2401 gaagat
//