LOCUS LJ662118 1235 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69824.graph_c0_seq1.
ACCESSION LJ662118
VERSION LJ662118.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1235)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1235
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69824.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 467 a 141 c 165 g 462 t
ORIGIN
1 agcagtggta tcaacgcaaa gttccggggt gctaaggaaa tttcatccgc atttgttaca
61 taacaaactg ctttcgtctc accatagtgt attctttacc aatgtatatt cgaaaacttt
121 atataaaact atttttacaa ggagcagagt tcttgtggta tatgaaaata caattaaaag
181 ttatactgaa ttattgatgc gatgatatga tttgatatgt tctctacaac agtatcatcc
241 tttaattttc ttttttcgaa gcaactttcg aaaaatattg taatttcaga taatgtaaat
301 ataaatcttt tatatcaatt tttctgtatt gtttttaata tgttataaaa atcttatcat
361 tgtttctcgg ataacaaaaa taaacgaata aacgttattt gtgatttctg aaagattata
421 atacaaatta atttaatgca taaattcttt caaaaacaat atgagaacat acgttttata
481 ggatacaata gtaatattta aacttcagat tactgatgat attaatgata aagattaaga
541 tatgacttac acacttttat gatttgatat tttatgaaga ataagtttag atgaaaaata
601 tgagagtatg aaaaagatat attttcgagt atttaagatt atattgatat ataatatgta
661 tataaaatat gtaaaacgat tgattttatt ctgttcacta atacacatac attatttgtg
721 tatattaaac ttctcttaaa attatacatt ctttttttta tatatttctg aatttttgtc
781 tgtcacgtaa aaaaagaacg ttaacattgt aaaaaagtaa gatattttct taaatatagt
841 aaagtattat ttaaaacaaa tcgaaggctg acgcacattt acaacaaaat attatataat
901 gattacgatg cttctataat gataaagatt ttcgaaattt caatgaaaga gaattcgagg
961 agatagattt taattgtaaa tctgaatatg tgtgcagtta tgttcgcaaa cctctcgata
1021 gatataaatc agctttctgt gcacaacaca aactagaaat tgtgatatat aataaaataa
1081 ttgaatatat attatttgta agattgcgat atgattgtaa tattttatta ttaacagaaa
1141 ctcttggaag agaaaaatat aaaagaactt tacatctcga cgtatgtctt tatgattggc
1201 cgcattattc ctaaatgtac tctgcgttga tacca
//