LOCUS LJ661438 1030 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69528.graph_c0_seq1.
ACCESSION LJ661438
VERSION LJ661438.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1030)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1030
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69528.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 331 a 208 c 220 g 271 t
ORIGIN
1 gggtgtttac aattcaaagt gactcggagg catgggatcg atagtctgcg cgtcgttttc
61 acacacttct atataatcca ttcgacctgt gatccattcg tcttgtgcct aaatatgccg
121 tctcgcgggg aggacatcct caaaggattt caggttaatt ggatgaatct gcgcgacgcc
181 gacagcggaa agattctctg gcagggcaac gaagacttat ctgtacctga cgtggaacac
241 gaggcacgtg taccaaagaa aatcctgcga tgccgcgcgg tgtcgaggga gatcaacttc
301 agctccgcgg aacctatgga gaggtttcgt ctggaacaga aggtactatt caagggacgt
361 tgtttggagg agtggttctt cgagttcgga ttcgtcattc cgaacagcac caacacctgg
421 caaagcttga tccaagcggc accggaaagt caaatgatgc ctgcgaatgt attaaacggc
481 aacgttgtaa tagaaacaaa attcttcgac gacgatctct tagtgtccac cagtcgagtc
541 cgtctcttct acgtctaaag cgatttccaa acggtcctac caatcgtaca taatcgcggg
601 accaatcggc atgaacggag agtacatgaa aatagaacaa ttgcacgtgt gataacaaac
661 acacaaaata aacaaaagtg tgacaaactg atcgatttgc gtcccttatg tcagacactt
721 ttcatgcata tattttaata taagattttg acaatctcat gattctagaa atctacatag
781 agattcacac aaacagatcg atatcaaaat tacaaagctt tatcaagcaa tagcgttttt
841 caaggcctag tgtatttaga atacgttttt cactcttgat aatgtgagga aaatgactgc
901 actgctgaag cacgtaattt atttgttact tgttaagtat gaataaatgc aataagtttt
961 gtacatattg taatacacta cactgcgaga gcaataaagt tttaaaaaaa gttaaaaaaa
1021 aaaaaaaaaa
//