LOCUS LJ661290 956 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c70112.graph_c0_seq1.
ACCESSION LJ661290
VERSION LJ661290.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 956)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..956
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c70112.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 265 a 193 c 212 g 286 t
ORIGIN
1 gggtctcgat gtatcagcag cagaacgata ccgtgaattt caattttggc gattccgtgg
61 agatgcgaca gttggcttgc tgctgcgccg aactacgccg tctagcaccg tcctgggtgg
121 gcaacgatgg caaaattgga gccatcagtc acgtgagagt cagttgtctg atatcgcaag
181 tgacgctact cgctggtgga acgatgagat tgccgattcc acggtatttc ttccaaactc
241 tgcagactac tagtattaag ctgtcggtgt cacctcaacc gcgtgttctc ggtgaacctg
301 tgtctgtacc gcaaggtagt caattagcgc tcaaagtcga aggagtgttg cgacacggtc
361 gacgggcatc tcttttccgt tccgttgctg ccgtgtgcat ttctatctcg acgacgccgc
421 cttcgaaaat taattctgat caaagggatt ccaatgtaaa cgaattgcag caaacggtaa
481 cacctcatcg ggatttcttc gcttgtgaat ttttattatc cttgggaata cctggaccta
541 cgataatgcc tccatgcgcg gtcggtgcga acaccgtcgc gaatagcggt ggtcaatatc
601 aaatcacggc gagcgcgagt atactcgaca aggacggcaa tgtgtggaag tgtggtccac
661 gttccactct tcccgttaga gtacacgagg aacctgcgaa gagaaagtta ccttaaggat
721 atgccatgca gtgtatttta taaaattttt attcaaatac actttttgat aaattataaa
781 taataacgaa ttttattaaa ttgttttcac atgtgattct ctcgtgattt tgcattgaat
841 tctaaatgac tattaattat gcatttttgt attataatta tgctgatatg ataagtattt
901 ttcgttatta tttaataaaa aattaaaatt tatattgata aaaaaaaaaa aaaaaa
//