LOCUS LJ661246 1215 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69511.graph_c0_seq1.
ACCESSION LJ661246
VERSION LJ661246.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1215)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1215
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69511.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 410 a 204 c 241 g 360 t
ORIGIN
1 ggggactgtg gctagcgtcc caccattgtg atagttggca cttccttccc ggttgaattc
61 gcattgattt ttatcaaaaa atgggagaaa atgtgcaagg gacgtttgtg tctgagaaaa
121 tttccaaaat aagatggcaa tatgaaaatt ttacggaagc gaagaatttt ttaaccggta
181 gttgggataa cccgataaat aaaataacat actggacatt taaaacgaat tatgacgaag
241 agtcataccc tgtagtcttg tcgtcatatt catttcttgg ggatgtaact gaactgaagt
301 ttatcagtaa agatttcttt gtcgctgcct catctttagg atcaataaga ttactgcaaa
361 ttgatgagga tacctgtact gaatttaagg aacatatgtc atgggagttt atacataatt
421 ttaaaacaac agattatgcc tcttgcactg cattgtctac ttttgaacaa gacatagctt
481 cagtgggaga ggatgggaag cttaatcttc tcacagctgc agaaaagaaa ccagttaggg
541 ttattgaaaa cgctgatagt tgctctatat attgcgccga cttcttaaaa cacaatgaag
601 tactcacggg aaattccaga gggcatatga aagtttggga tctgagaaat gatcgagatg
661 tgcccgccac tactttcatg ctctctgatc aaattaaaac agcaactacg agtattaccc
721 atcatcctac acaaaggcat attgtggtcg ccggtggaga agacggcagt ttaactgtct
781 gggatttaag gcagaatact tatccgatgt cacaactcaa tgcgcacacc aaggccgtta
841 gcgagatatt attccatcaa gacagacctg acaatctgtt tacttgttct gttagcggag
901 agttgtggca ttggaacaat gcacaaagtt cgaaactaaa acttgattct gcagacatgc
961 attggttgaa tacaattagt gcaaatggaa aagttaatgt gaattcactg tgtgctgcta
1021 tgcacaaacc aataaacagt attgatatca acagatcgac attacttttt ggatgtgaca
1081 atgaagctat atatattata agaaatgtac ttatttaaca gagtaaaatg tgtatatata
1141 cattattttt gtaactttat taaacttata aaataaactt gaaattgcca tcttttctaa
1201 aaaaaaaaaa aaaaa
//