LOCUS LJ659999 6241 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68271.graph_c2_seq13.
ACCESSION LJ659999
VERSION LJ659999.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 6241)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..6241
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68271.graph_c2_seq13"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 2077 a 944 c 1082 g 2138 t
ORIGIN
1 tggtatcaac gcagagcaca taatcttgat ttttcatgaa aatatgaatt caatttatga
61 tctggaaata atctgtaaaa tttctttagt agcattaagt gggttaaata ataataaacc
121 tagatcttgt taaacaattt tattatagtt ccataggtaa atgtttttta aatttttgat
181 tgaagtagat tgtcttatgt taaaatcatt tatgaaaatt tagattgggc gaatattgta
241 tattaacatt tcgtaaaaga atttgaaagt gttttttggt ttattatgat aatcttgttt
301 aaatttttta ttgtttggct atgagtaaga cattttttct tatttataat ttttattttc
361 ttcttttatt acaacagaat gttatatttc atgcaaatcg tcatttggga aaatatttca
421 tgcaactatt gataaattca tacagtttgc tcatatgcag gtttgctgaa ttctatttta
481 gcgataatgg atcgtagaat caattatttt attctgcaac tagacattcc tgatgtatgg
541 atattagttt caaatttctt atgtttagaa atgaaattta ttttaaatgc gattatgcaa
601 aaagattgaa tttgtcatat ttatcaagag aattttttct aacaaattag ctttactttc
661 tttctgttat tggataaatt acaaaaagaa tgtcactttt tgttggatgt agaaattact
721 gatagcagta aaagaaaaga cgagtgttat ttccaagagt tactagtgat ctctccgcga
781 tagtttcttg cttttaattt ttttttaaat caaattctat tcatgcattt atctcaatat
841 cctcattaaa ctttaaaaat ttagtaataa aattacgtta attattatag agagaagttg
901 agaaagattt aaaaacgaaa tcttaggtaa tgtgaattcc agctcattgc ccaacagcgt
961 atgtatgtcg caaactgtgc attgagcatt gcggacaaag actgagtacg tctaatgagg
1021 aaaacagaaa gggagaaaga gataaacaag cgataaaata acgaaagtta agcccgcgta
1081 tatttcttaa gtcgagcttt tatataagcc actttgagag aaagacttgt cagatcgtgt
1141 tccaatccaa agatgtgaag cgtgatgaag aatatgtgcg tcgtgacgtc ttgaaaagat
1201 gcgcataatc actaaagcgt attttttact tttgtaccgt tgttccactg ttggagcacg
1261 atctcccacg agatgttttc tgacacgtcg tacttgcgca tatcgacatg ctcgtcttcg
1321 cgtgattatg tacacgttag cacgcgttgc aaaagaaatt gaatggaaga gcggaaaggg
1381 agtcatcgag agcactcccc acgcggaaca cgatagtcga ggggatatgc agtattctat
1441 tgtcaacaac acgttttaac tttatgcact aatatactat tgttatctaa tttttatcga
1501 gatattattt atataagtat aaaacccgca gtctgcgacg attcgattga aaggaaaacg
1561 acgcgattaa tttcatgacg atcgttatat cgtgtcatta gcgaaaacgc accatggcgt
1621 ggaaatccgt cagtcgtttc atgcgtctta aaattaagct gaagaacgta ttgaaatttc
1681 gaaggcaaca tgtggttaaa aaaagaaatt tcacaattat tcatctgctg ttttacgcat
1741 gagacgaacg atcgcagacg ctcatctctc ctgttgttgg cgaccgcgcg aagcttccgg
1801 aagtgagaca tgcgttcatg aaagttcata ggtcacgagg acacggtgct aattaaaaag
1861 ttccaaaaac cgacgtacgc ttcgacgtgc gtgcatttgt acgcgcgtgt atgcttagac
1921 acgagattga aacatgtagt gagagtgaat gtaggaacaa taggaagtga ttaccgatgt
1981 tgatcgtgca actcactcat cgaagcacta ttcggggaaa tgtgcgcacg ccgcacggtt
2041 tcgcaatgcc actagagaaa ttaatttcca ctcggtataa tatattttta aagtttctgt
2101 cattttttgt aacattttat attaaagaaa ttttctcttg tcgaatgtat taggtgtggc
2161 aatctgtttt cacacgtaat ataattataa gccttcgtga aaaaaaagca tctacttatg
2221 gacttcacat tcagcatcgg acaaggcacg aaagagcaga aatttggcga cgcattcttt
2281 tatactattg tgtgcataca atagatataa cattacacaa aacacagaaa catagctaag
2341 tgcctattcg tacaaacaag gggagggaag gaaaaccaca gcgattgata aatagtgtaa
2401 cggtaacgat ttctcccctt tttggaagaa catagtcacc gtggaagcga gccgttttta
2461 ttacccgaca atatataaat agatagttat ttagtgaatc tataaggttg attaatttac
2521 tcggaatggc accttcagag gtgctcctac catatttgag ataatagcaa gatattgctt
2581 tcttttttgt taatcttatt tatttttttg tgtacagaat tagtgtgaac aatatataat
2641 ctttggtaat caaaaattct ttaaaattgc cttctaatcg taaacattgg tgggatatat
2701 ctggcgtgtg tgaaataaat gtaataaaaa ttcaaaatat actacattaa aattactctt
2761 tagatctgaa ctgttttttt ctttgagata aaaggaaagg ccatttcgaa tcaatcaatc
2821 aatctattat aatctccgga ttgtcgagcg atcatgcatc agggtaccta cggaacgcga
2881 gcgataatat cgagcttatc tcgagtagaa atctcgattt tatatcatta attaggcgcg
2941 cttgatctca atcttgcgca ataaaatttt gaccgccgca ggaacttgcg tcttcaattt
3001 aaagcaatac acgtagatta tcgtggcgat atcgaacgtt ttatgattcg attgatacgc
3061 ttggcaaccg gattaataat aagaatcgag tgtactcatt aggcagatgt aagaatggtg
3121 agatagaaat ttgatgatcc ttgattctta gaagcgcacc agctagagca tacattttat
3181 aaatcacgat gtcctttaat ctacatgatg catcctttat atacggggcc tttttacaat
3241 tactaacgat tgttcaatcg ttaattgtcg atgcgaaaag aaacgtgaat ttatctcagt
3301 acgataaaat agataattgt gagcgtgctt ctcaaaggat taagacataa gtatgtgaag
3361 gtggagaaag ctgtacgctt gtccgattaa tcgattgtca attagatgta ttacaaaatg
3421 aatgattgtt tccatttttt tgttatataa attgtaatgg aagattatta tcaaagacaa
3481 ttgcaagaaa aattcgtaaa ataaaaattt actaatagaa cgaaaaattc tggttatacg
3541 ccgagatagt tatagaagaa taattttttt cacgttttta ttatacttgt gcatattaca
3601 agttcgttat attaaaattt ttgaaggttt aaaatagaat aactgattaa tcgtacagcg
3661 tcggcaaggg taaatatctc tccctagccc attctgcatc ctgcacaact cttgaattgt
3721 agttaattac atttatatac gatgtatcgt tgtagaagta tagcgtcgaa tggtatttta
3781 atgtatagaa aactgaatga tacacagtaa aagaagggaa acaaattgga aatacgtgtg
3841 aaagaaagaa ttgggtaaag aaaaagggaa aagttaggtg acgagaggaa cgaaattatt
3901 ttatcgcaca aattattcaa caaaattcta caaattattt gaaacacaaa ctaaattttt
3961 ttaatatata atcacattaa cttctggaac acagtacaat atgtattttt ttctaaaact
4021 gttttttttt cttttttgtt tatagaaata tttgttcgtt acttatcaag tcgttattta
4081 ttgagtttta attatttaat atatcagatt atatatcatc tatctattta catataatta
4141 gctgatatga tagcagaatc gcaacgttaa atcgctctga ttcctctcct ccacctaaat
4201 ttcatgatgg gacaagttac acggataggt tactggacga catatgaaga tttgcataca
4261 ataaaattat ttatacagaa gtaacgaaac ggcaatgctc tcgcatcgtg cattaggccg
4321 attcgttcga aatggttccc tcccgcgaga atacttttat cttagaggct gtatattggc
4381 agatatttta cacaactggg gaagtagcgt ttgtgagagt aaaatctttt tcattgtaga
4441 tttcatacac catgaattta aaacacgtaa ttcttacaat tgtgcatttt tcaccgcgaa
4501 tttattttcg caaaatacat ttctgcggag agtccggatt tatgtactat ggattcaggt
4561 aatacagatg tttttttacg aatcattaac aaggtgtagt agatcccaga caatcataac
4621 aaaggcatct taaattgttt aacctgatat actttctttt atttagattc ttgtattaaa
4681 aagacgtaga ctttgattag agttagcttg gtgaaatatt ggttactcgt taaattcgat
4741 aggaacattt tgttcagtac atttcatttt aacattcccg tagttttcga taatcttaaa
4801 aaaataatag tctgccaaaa gttccgtaag gttttaataa tcacagaatg ttttgcctct
4861 atttgcatct atattttatt tgtaaccagt gtatttgatt ttaatttgta agcagtgttg
4921 aaaattggcg attcttggta tgcatattac tttttaatta gattagtctt tcggcaataa
4981 taactgtact agtattattg tatataattg aacactttgg ttattacgtt aaattagtca
5041 cgagttttat tgcgaatgtg tgtgtatgaa ttgccgatag ctaatgatag tagtacatca
5101 attattgata tcccctttct ttaccctaga gttggatcgt ttatttcgaa aattgtataa
5161 gtaatgctaa aaactccatt aaaataatct tgaattttaa tattgtggaa ttgaacttag
5221 atttttgaaa taaacggctc aatttataac ctcgagattc catcctattt tgaaatctga
5281 atttgattct caaatcgcat aaacctcgag atatttatat gtatgttcat gagcgatgcg
5341 aatacaaccc ctctcgtgtt ttacctagcg caaattattt tacctttgtt tgccgtctca
5401 tacttagtct ttcatgtcca actgaagcct gtagagatcc ttatctgatg atttctttca
5461 gatcaaaaag cgaaactacc gaaagcggcg aatctgtgca cgaggaagct gagtccacca
5521 tctaaattca aagaaaaaaa accgtccttc catagaataa taattctccg ttgtgtgcct
5581 tgccacattt ttaagggaac tatagatgaa aatctgtttc agtacaataa atatatactt
5641 aatagagaaa aataaatcac aatttttttg cttcacagaa acatggtgta tgcatttgtt
5701 tccgcgagtt ctggatattt ataaggacga atagcttgcg attttcgtcc tttcctagtt
5761 ttaatgattt tgcagactga aaaaagaaaa gaataattaa caattaatct tctatggtac
5821 attaaattca ttgtaagaga aaaaaataaa atcgtaataa aaagtacatt tataaaattt
5881 gttatatatc cattttctcc atttaaattg tcaataattc gtttcaacat cacaaagtaa
5941 gataatgtaa attatgaaaa tgtttaaatt attattccat caaggaacca caatttgaat
6001 ttattataca ttaacgaaca tagaaagaat gtttttcaag actatgaata attattatgt
6061 aatattgata agaacaagat taaattttca catatgctgt gatgtaacaa tgtgtaacat
6121 tgtggcgtcc tagagccggc tctctcttat gtcatacatc acgtgaaggt atctcttaca
6181 cgagtgcatc ttaggaaata aaatatttaa caaaaacata tttcctgtgt aacacatgaa
6241 a
//