LOCUS LJ659995 5608 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68271.graph_c2_seq9.
ACCESSION LJ659995
VERSION LJ659995.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 5608)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5608
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68271.graph_c2_seq9"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1864 a 883 c 992 g 1869 t
ORIGIN
1 ttttctttct gttattggat aactttcttt ctgttattgg ataaattaca aaaagaatgt
61 cactttttgt tggatgtaga aattactgat agcagtaaaa gaaaagacga gtgttatttc
121 caagagttac tagtgatctc tccgcgatag tttcttgctt ttaatttttt tttaaatcaa
181 attctattca tgcatttatc tcaatatcct cattaaactt taaaaattta gtaataaaat
241 tacgttaatt attatagaga gaagttgaga aagatttaaa aacgaaatct taggtaatgt
301 gaattccagc tcattgccca acagcgtatg tatgtcgcaa actgtgcatt gagcattgcg
361 gacaaagact gagtacgtct aatgaggaaa acagaaaggg agaaagagat aaacaagcga
421 taaaataacg aaagttaagc ccgcgtatat ttcttaagtc gagcttttat ataagccact
481 ttgagagaaa gacttgtcag atcgtgttcc aatccaaaga tgtgaagcgt gatgaagaat
541 atgtgcgtcg tgacgtcttg aaaagatgcg cataatcact aaagcgtatt ttttactttt
601 gtaccgttgt tccactgttg gagcacgatc tcccacgaga tgttttctga cacgtcgtac
661 ttgcgcatat cgacatgctc gtcttcgcgt gattatgtac acgttagcac gcgttgcaaa
721 agaaattgaa tggaagagcg gaaagggagt catcgagagc actccccacg cggaacacga
781 tagtcgaggg gatatgcagt attctattgt caacaacacg ttttaacttt atgcactaat
841 atactattgt tatctaattt ttatcgagat attatttata taagtataaa acccgcagtc
901 tgcgacgatt cgattgaaag gaaaacgacg cgattaattt catgacgatc gttatatcgt
961 gtcattagcg aaaacgcacc atggcgtgga aatccgtcag tcgtttcatg cgtcttaaaa
1021 ttaagctgaa gaacgtattg aaatttcgaa ggcaacatgt ggttaaaaaa agaaatttca
1081 caattattca tctgctgttt tacgcatgag acgaacgatc gcagacgctc atctctcctg
1141 ttgttggcga ccgcgcgaag cttccggaag tgagacatgc gttcatgaaa gttcataggt
1201 cacgaggaca cggtgctaat taaaaagttc caaaaaccga cgtacgcttc gacgtgcgtg
1261 catttgtacg cgcgtgtatg cttagacacg agattgaaac atgtagtgag agtgaatgta
1321 ggaacaatag gaagtgatta ccgatgttga tcgtgcaact cactcatcga agcactattc
1381 ggggaaatgt gcgcacgccg cacggtttcg caatgccact agagaaatta atttccactc
1441 ggtataatat atttttaaag tttctgtcat tttttgtaac attttatatt aaagaaattt
1501 tctcttgtcg aatgtattag gtgtggcaat ctgttttcac acgtaatata attataagcc
1561 ttcgtgaaaa aaaagcatct acttatggac ttcacattca gcatcggaca aggcacgaaa
1621 gagcagaaat ttggcgacgc attcttttat actattgtgt gcatacaata gatataacat
1681 tacacaaaac acagaaacat agctaagtgc ctattcgtac aaacaagggg agggaaggaa
1741 aaccacagcg attgataaat agtgtaacgg taacgatttc tccccttttt ggaagaacat
1801 agtcaccgtg gaagcgagcc gtttttatta cccgacaata tataaataga tagttattta
1861 gtgaatctat aaggttgatt aatttactcg gaatggcacc ttcagaggtg ctcctaccat
1921 atttgagata atagcaagat attgctttct tttttgttaa tcttatttat ttttttgtgt
1981 acagaattag tgtgaacaat atataatctt tggtaatcaa aaattcttta aaattgcctt
2041 ctaatcgtaa acattggtgg gatatatctg gcgtgtgtga aataaatgta ataaaaattc
2101 aaaatatact acattaaaat tactctttag atctgaactg tttttttctt tgagataaaa
2161 ggaaaggcca tttcgaatca atcaatcaat ctattataat ctccggattg tcgagcgatc
2221 atgcatcagg gtacctacgg aacgcgagcg ataatatcga gcttatctcg agtagaaatc
2281 tcgattttat atcattaatt aggcgcgctt gatctcaatc ttgcgcaata aaattttgac
2341 cgccgcagga acttgcgtct tcaatttaaa gcaatacacg tagattatcg tggcgatatc
2401 gaacgtttta tgattcgatt gatacgcttg gcaaccggat taataataag aatcgagtgt
2461 actcattagg cagatgtaag aatggtgaga tagaaatttg atgatccttg attcttagaa
2521 gcgcaccagc tagagcatac attttataaa tcacgatgtc ctttaatcta catgatgcat
2581 cctttatata cggggccttt ttacaattac taacgattgt tcaatcgtta attgtcgatg
2641 cgaaaagaaa cgtgaattta tctcagtacg ataaaataga taattgtgag cgtgcttctc
2701 aaaggattaa gacataagta tgtgaaggtg gagaaagctg tacgcttgtc cgattaatcg
2761 attgtcaatt agatgtatta caaaatgaat gattgtttcc atttttttgt tatataaatt
2821 gtaatggaag attattatca aagacaattg caagaaaaat tcgtaaaata aaaatttact
2881 aatagaacga aaaattctgg ttatacgccg agatagttat agaagaataa tttttttcac
2941 gtttttatta tacttgtgca tattacaagt tcgttatatt aaaatttttg aaggtttaaa
3001 atagaataac tgattaatcg tacagcgtcg gcaagggtaa atatctctcc ctagcccatt
3061 ctgcatcctg cacaactctt gaattgtagt taattacatt tatatacgat gtatcgttgt
3121 agaagtatag cgtcgaatgg tattttaatg tatagaaaac tgaatgatac acagtaaaag
3181 aagggaaaca aattggaaat acgtgtgaaa gaaagaattg ggtaaagaaa aagggaaaag
3241 ttaggtgacg agaggaacga aattatttta tcgcacaaat tattcaacaa aattctacaa
3301 attatttgaa acacaaacta aattttttta atatataatc acattaactt ctggaacaca
3361 gtacaatatg tatttttttc taaaactgtt tttttttctt ttttgtttat agaaatattt
3421 gttcgttact tatcaagtcg ttatttattg agttttaatt atttaatata tcagattata
3481 tatcatctat ctatttacat ataattagct gatatgatag cagaatcgca acgttaaatc
3541 gctctgattc ctctcctcca cctaaatttc atgatgggac aagttacacg gataggttac
3601 tggacgacat atgaagattt gcatacaata aaattattta tacagaagta acgaaacggc
3661 aatgctctcg catcgtgcat taggccgatt cgttcgaaat ggttccctcc cgcgagaata
3721 cttttatctt agaggctgta tattggcaga tattttacac aactggggaa gtagcgtttg
3781 tgagagtaaa atctttttca ttgtagattt catacaccat gaatttaaaa cacgtaattc
3841 ttacaattgt gcatttttca ccgcgaattt attttcgcaa aatacatttc tgcggagagt
3901 ccggatttat gtactatgga ttcaggtaat acagatgttt ttttacgaat cattaacaag
3961 gtgtagtaga tcccagacaa tcataacaaa ggcatcttaa attgtttaac ctgatatact
4021 ttcttttatt tagattcttg tattaaaaag acgtagactt tgattagagt tagcttggtg
4081 aaatattggt tactcgttaa attcgatagg aacattttgt tcagtacatt tcattttaac
4141 attcccgtag ttttcgataa tcttaaaaaa ataatagtct gccaaaagtt ccgtaaggtt
4201 ttaataatca cagaatgttt tgcctctatt tgcatctata ttttatttgt aaccagtgta
4261 tttgatttta atttgtaagc agtgttgaaa attggcgatt cttggtatgc atattacttt
4321 ttaattagat tagtctttcg gcaataataa ctgtactagt attattgtat ataattgaac
4381 actttggtta ttacgttaaa ttagtcacga gttttattgc gaatgtgtgt gtatgaattg
4441 ccgatagcta atgatagtag tacatcaatt attgatatcc cctttcttta ccctagagtt
4501 ggatcgttta tttcgaaaat tgtataagta atgctaaaaa ctccattaaa ataatcttga
4561 attttaatat tgtggaattg aacttagatt tttgaaataa acggctcaat ttataacctc
4621 gagattccat cctattttga aatctgaatt tgattctcaa atcgcataaa cctcgagata
4681 tttatatgta tgttcatgag cgatgcgaat acaacccctc tcgtgtttta cctagcgcaa
4741 attattttac ctttgtttgc cgtctcatac ttagtctttc atgtccaact gaagcctgta
4801 gagatcctta tctgatgatt tctttcagat caaaaagcga aactaccgaa agcggcgaat
4861 ctgtgcacga ggaagctgag tccaccatct aaattcaaag aaaaaaaacc gtccttccat
4921 agaataataa ttctccgttg tgtgccttgc cacattttta agggaactat agatgaaaat
4981 ctgtttcagt acaataaata tatacttaat agagaaaaat aaatcacaat ttttttgctt
5041 cacagaaaca tggtgtatgc atttgtttcc gcgagttctg gatatttata aggacgaata
5101 gcttgcgatt ttcgtccttt cctagtttta atgattttgc agactgaaaa aagaaaagaa
5161 taattaacaa ttaatcttct atggtacatt aaattcattg taagagaaaa aaataaaatc
5221 gtaataaaaa gtacatttat aaaatttgtt atatatccat tttctccatt taaattgtca
5281 ataattcgtt tcaacatcac aaagtaagat aatgtaaatt atgaaaatgt ttaaattatt
5341 attccatcaa ggaaccacaa tttgaattta ttatacatta acgaacatag aaagaatgtt
5401 tttcaagact atgaataatt attatgtaat attgataaga acaagattaa attttcacat
5461 atgctgtgat gtaacaatgt gtaacattgt ggcgtcctag agccggctct ctcttatgtc
5521 atacatcacg tgaaggtatc tcttacacga gtgcatctta ggaaataaaa tatttaacaa
5581 aaacatattt cctgtgtaac acatgaaa
//