LOCUS LJ659989 9253 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68271.graph_c2_seq3.
ACCESSION LJ659989
VERSION LJ659989.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 9253)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..9253
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68271.graph_c2_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 3089 a 1455 c 1661 g 3048 t
ORIGIN
1 gtgtgtgtgt gtgtgtgttt gtccaacgcg cgcggcccag cctcttcgtg actgcgtgcg
61 tgcgtcgtgc ttctatttct acgttctgtt aggagtatct aggagatctc ggagcagcga
121 gccgccagga tgaccagcag tgagcaaacg cgggagcaga cgatcagcaa cgtcgagacc
181 gagtatcacg agatcaactc caagggagct tggccgattc tctatcagca tatacgtaac
241 gaatgtggaa attatgatta cacatgcaac gaatcaaaaa aaccacagaa caaaaacttg
301 aatcgctaca gggatgtggc accatatgat cacactagaa ttattcttag aagaggtgta
361 tgtgactata ttcacgccaa tctcatacaa gtggatcgtg ctcataggca atatatcctg
421 acgcaaggac ccttgccgaa tactaccggc cacttttggc taatggtatg ggagcaaaat
481 agcagagctg tattgatgtt aaataagata atcgaaaaga atcaagtcaa atgccatcaa
541 tactggcctc tggatgactc acacgaacct actatgatgt ttgaagacgt cagtttacag
601 gtggactatg tcagcaagat agaatcttca gactacacta ctaggacatt acgtataacg
661 gacttggaaa ctaacgatag tagagaaatc ttacattttc attataccac ttggccagac
721 ttcggagtac cgcaacgtcc aacggccttt ttacgtttct tggcagatgt cagaaaatca
781 ggagcgttag atcaaaatgt tggcccgccc gttgtacatt gttccgcggg aataggaaga
841 tcaggaacat tttgcttggt tgacgcgtgc ttagtattga ttgaaaaata tggtttaaat
901 gatttggatg tgcgacatga attgttggaa atgagacggt ctcgtatggg tcttatacaa
961 acgcctgaac aactttgttt ttcatatgct gccatcattc agggagcaaa acaattacca
1021 cttgataaca tggataatga cgatacaact catgatgaaa taattacgag ttacgacgag
1081 atgaataata aaaatcatcc attagaaaaa gacgatgaac ctcctcctct accacctcca
1141 agaggagagt ctttaacgcg tagtatgatg gcagatctaa gcccggatga ttcatctgat
1201 aatgaagaac tagagggacc gcctgataaa ccgttgccat gtgaaccacc gaatcatgta
1261 gatttatctg cagatacaaa tctatctaca tctaatacaa attgtgtacg tgaacaaaat
1321 gctgacgatg gcgtggtact agacgacact ccttccgacg acgctgaaaa ctctgtttta
1381 ctaaacaact ctccgtccaa ttcagacgcg aaagaggagg tacgtcgacg caagatggaa
1441 aagaatgaac gactagcgac acaagtacgc gagatgaaac gccggcagaa ggagatggaa
1501 gaatggcaaa atttcaagag gtcattattt aaccccctta aaataagctt aggcattggg
1561 atcggtgggg gtatcatagc gatctgttac tacctgtaca tgcgtagtta gatctatcgt
1621 gtcgcattta aggatgtcgt acgtacgtat atacacgcat tatttttcgt actgtcagta
1681 tagtaatcga ggaaaatctt aatatgagat tctattgcga ggttttaaaa gcctaatctt
1741 agctgaaaca tcttggcaag agtataaagg ctttcgtaaa caaagagttt cgtattggca
1801 gtagaatcat tcgtcagcaa tatcgcaaac gataccatct ccgagaaact aagcaaaggg
1861 agagaaaagt tacaaaaaac aatagaatac aataaaatga tgctgaaaag tgcaaagtac
1921 agtacatttt taaactgcac tgttatatgt tcgagtaaca agaatgaaaa tagaagcact
1981 gatgaaggag atggactttc gatatttgta tttttatatt gtgatttatt ctatgagtat
2041 ctagaacatt agaatatatg tttttttttt cacaattttt ttatttgcta ccagagaaac
2101 aaatacctta ttctgcatgt gtttatgaaa acgttaatga agaaaagtaa attttacgac
2161 atgattctta tagataaaat ataaacgtgt tatttaccag aattaattcc acagataaat
2221 tactctttta gataaagtat acttaagggt tagctttgca atagtttatc acaatataat
2281 catataattt tataaatata tgattgtgtg gatttgcgta aatttcgatt atcggatcat
2341 tttatttact tatagcgttg atgacacgct catacagtga tacgcgtaaa cacagaacga
2401 aaatataaat cagttttatt tattacggat atacaaagct gatttgaatg aaaagcttat
2461 cgttattaag taactcttga ctttattatc tcccgcacat aaatacccag taaacataaa
2521 atcattacta ctatattgtt acaacgatat ttgataacat atgtcatttt caaatcataa
2581 tttatcgttg tatgcttcaa tgtgaacaaa ttttgatcat gacttggaga taatgttttc
2641 aaaatttgaa caacgtttcg aaaaaaaatt atatcaaatt gtttgaaaat gtttatacaa
2701 tatcatttta aaagtatatg aaaccaatat tgttaaatgt tttaatgttt cttattgctt
2761 actgggtaca tttttctttt gcggaattcg atctttttct tgttatttag ttaatataaa
2821 caaaagaaag aagacaaatt atatgtatag ttttctaact gtttctaaat gaatcgaact
2881 taatttcacc aaaatctttg aagagttagg atgaatgatt tatttccaaa tcatctttat
2941 aatttataat ttaaattcat attttcaaat actgcagctt atgtgttagt aaaactgtgg
3001 ccaagttaag agtgtaagag ttcatgagca cataatcttg atttttcatg aaaatatgaa
3061 ttcaatttat gatctggaaa taatctgtaa aatttcttta gtagcattaa gtgggttaaa
3121 taataataaa cctagatctt gttaaacaat tttattatag ttccataggt aaatgttttt
3181 taaatttttg attgaagtag attgtcttat gttaaaatca tttatgaaaa tttagattgg
3241 gcgaatattg tatattaaca tttcgtaaaa gaatttgaaa gtgttttttg gtttattatg
3301 ataatcttgt ttaaattttt tattgtttgg ctatgagtaa gacatttttt cttatttata
3361 atttttattt tcttctttta ttacaacaga atgttatatt tcatgcaaat cgtcatttgg
3421 gaaaatattt catgcaacta ttgataaatt catacagttt gctcatatgc aggtttgctg
3481 aattctattt tagcgataat ggatcgtaga atcaattatt ttattctgca actagacatt
3541 cctgatgtat ggatattagt ttcaaatttc ttatgtttag aaatgaaatt tattttaaat
3601 gcgattatgc aaaaagattg aatttgtcat atttatcaag agaatttttt ctaacaaatt
3661 agctttactt tctttctgtt attggataaa ttacaaaaag aatgtcactt tttgttggat
3721 gtagaaatta ctgatagcag taaaagaaaa gacgagtgtt atttccaaga gttactagtg
3781 atctctccgc gatagtttct tgcttttaat ttttttttaa atcaaattct attcatgcat
3841 ttatctcaat atcctcatta aactttaaaa atttagtaat aaaattacgt taattattat
3901 agagagaagt tgagaaagat ttaaaaacga aatcttaggt aatgtgaatt ccagctcatt
3961 gcccaacagc gtatgtatgt cgcaaactgt gcattgagca ttgcggacaa agactgagta
4021 cgtctaatga ggaaaacaga aagggagaaa gagataaaca agcgataaaa taacgaaagt
4081 taagcccgcg tatatttctt aagtcgagct tttatataag ccactttgag agaaagactt
4141 gtcagatcgt gttccaatcc aaagatgtga agcgtgatga agaatatgtg cgtcgtgacg
4201 tcttgaaaag atgcgcataa tcactaaagc gtatttttta cttttgtacc gttgttccac
4261 tgttggagca cgatctccca cgagatgttt tctgacacgt cgtacttgcg catatcgaca
4321 tgctcgtctt cgcgtgatta tgtacacgtt agcacgcgtt gcaaaagaaa ttgaatggaa
4381 gagcggaaag ggagtcatcg agagcactcc ccacgcggaa cacgatagtc gaggggatat
4441 gcagtattct attgtcaaca acacgtttta actttatgca ctaatatact attgttatct
4501 aatttttatc gagatattat ttatataagt ataaaacccg cagtctgcga cgattcgatt
4561 gaaaggaaaa cgacgcgatt aatttcatga cgatcgttat atcgtgtcat tagcgaaaac
4621 gcaccatggc gtggaaatcc gtcagtcgtt tcatgcgtct taaaattaag ctgaagaacg
4681 tattgaaatt tcgaaggcaa catgtggtta aaaaaagaaa tttcacaatt attcatctgc
4741 tgttttacgc atgagacgaa cgatcgcaga cgctcatctc tcctgttgtt ggcgaccgcg
4801 cgaagcttcc ggaagtgaga catgcgttca tgaaagttca taggtcacga ggacacggtg
4861 ctaattaaaa agttccaaaa accgacgtac gcttcgacgt gcgtgcattt gtacgcgcgt
4921 gtatgcttag acacgagatt gaaacatgta gtgagagtga atgtaggaac aataggaagt
4981 gattaccgat gttgatcgtg caactcactc atcgaagcac tattcgggga aatgtgcgca
5041 cgccgcacgg tttcgcaatg ccactagaga aattaatttc cactcggtat aatatatttt
5101 taaagtttct gtcatttttt gtaacatttt atattaaaga aattttctct tgtcgaatgt
5161 attaggtgtg gcaatctgtt ttcacacgta atataattat aagccttcgt gaaaaaaaag
5221 catctactta tggacttcac attcagcatc ggacaaggca cgaaagagca gaaatttggc
5281 gacgcattct tttatactat tgtgtgcata caatagatat aacattacac aaaacacaga
5341 aacatagcta agtgcctatt cgtacaaaca aggggaggga aggaaaacca cagcgattga
5401 taaatagtgt aacggtaacg atttctcccc tttttggaag aacatagtca ccgtggaagc
5461 gagccgtttt tattacccga caatatataa atagatagtt atttagtgaa tctataaggt
5521 tgattaattt actcggaatg gcaccttcag aggtgctcct accatatttg agataatagc
5581 aagatattgc tttctttttt gttaatctta tttatttttt tgtgtacaga attagtgtga
5641 acaatatata atctttggta atcaaaaatt ctttaaaatt gccttctaat cgtaaacatt
5701 ggtgggatat atctggcgtg tgtgaaataa atgtaataaa aattcaaaat atactacatt
5761 aaaattactc tttagatctg aactgttttt ttctttgaga taaaaggaaa ggccatttcg
5821 aatcaatcaa tcaatctatt ataatctccg gattgtcgag cgatcatgca tcagggtacc
5881 tacggaacgc gagcgataat atcgagctta tctcgagtag aaatctcgat tttatatcat
5941 taattaggcg cgcttgatct caatcttgcg caataaaatt ttgaccgccg caggaacttg
6001 cgtcttcaat ttaaagcaat acacgtagat tatcgtggcg atatcgaacg ttttatgatt
6061 cgattgatac gcttggcaac cggattaata ataagaatcg agtgtactca ttaggcagat
6121 gtaagaatgg tgagatagaa atttgatgat ccttgattct tagaagcgca ccagctagag
6181 catacatttt ataaatcacg atgtccttta atctacatga tgcatccttt atatacgggg
6241 cctttttaca attactaacg attgttcaat cgttaattgt cgatgcgaaa agaaacgtga
6301 atttatctca gtacgataaa atagataatt gtgagcgtgc ttctcaaagg attaagacat
6361 aagtatgtga aggtggagaa agctgtacgc ttgtccgatt aatcgattgt caattagatg
6421 tattacaaaa tgaatgattg tttccatttt tttgttatat aaattgtaat ggaagattat
6481 tatcaaagac aattgcaaga aaaattcgta aaataaaaat ttactaatag aacgaaaaat
6541 tctggttata cgccgagata gttatagaag aataattttt ttcacgtttt tattatactt
6601 gtgcatatta caagttcgtt atattaaaat ttttgaaggt ttaaaataga ataactgatt
6661 aatcgtacag cgtcggcaag ggtaaatatc tctccctagc ccattctgca tcctgcacaa
6721 ctcttgaatt gtagttaatt acatttatat acgatgtatc gttgtagaag tatagcgtcg
6781 aatggtattt taatgtatag aaaactgaat gatacacagt aaaagaaggg aaacaaattg
6841 gaaatacgtg tgaaagaaag aattgggtaa agaaaaaggg aaaagttagg tgacgagagg
6901 aacgaaatta ttttatcgca caaattattc aacaaaattc tacaaattat ttgaaacaca
6961 aactaaattt ttttaatata taatcacatt aacttctgga acacagtaca atatgtattt
7021 ttttctaaaa ctgttttttt ttcttttttg tttatagaaa tatttgttcg ttacttatca
7081 agtcgttatt tattgagttt taattattta atatatcaga ttatatatca tctatctatt
7141 tacatataat tagctgatat gatagcagaa tcgcaacgtt aaatcgctct gattcctctc
7201 ctccacctaa atttcatgat gggacaagtt acacggatag gttactggac gacatatgaa
7261 gatttgcata caataaaatt atttatacag aagtaacgaa acggcaatgc tctcgcatcg
7321 tgcattaggc cgattcgttc gaaatggttc cctcccgcga gaatactttt atcttagagg
7381 ctgtatattg gcagatattt tacacaactg gggaagtagc gtttgtgaga gtaaaatctt
7441 tttcattgta gatttcatac accatgaatt taaaacacgt aattcttaca attgtgcatt
7501 tttcaccgcg aatttatttt cgcaaaatac atttctgcgg agagtccgga tttatgtact
7561 atggattcag gtaatacaga tgttttttta cgaatcatta acaaggtgta gtagatccca
7621 gacaatcata acaaaggcat cttaaattgt ttaacctgat atactttctt ttatttagat
7681 tcttgtatta aaaagacgta gactttgatt agagttagct tggtgaaata ttggttactc
7741 gttaaattcg ataggaacat tttgttcagt acatttcatt ttaacattcc cgtagttttc
7801 gataatctta aaaaaataat agtctgccaa aagttccgta aggttttaat aatcacagaa
7861 tgttttgcct ctatttgcat ctatatttta tttgtaacca gtgtatttga ttttaatttg
7921 taagcagtgt tgaaaattgg cgattcttgg tatgcatatt actttttaat tagattagtc
7981 tttcggcaat aataactgta ctagtattat tgtatataat tgaacacttt ggttattacg
8041 ttaaattagt cacgagtttt attgcgaatg tgtgtgtatg aattgccgat agctaatgat
8101 agtagtacat caattattga tatccccttt ctttacccta gagttggatc gtttatttcg
8161 aaaattgtat aagtaatgct aaaaactcca ttaaaataat cttgaatttt aatattgtgg
8221 aattgaactt agatttttga aataaacggc tcaatttata acctcgagat tccatcctat
8281 tttgaaatct gaatttgatt ctcaaatcgc ataaacctcg agatatttat atgtatgttc
8341 atgagcgatg cgaatacaac ccctctcgtg ttttacctag cgcaaattat tttacctttg
8401 tttgccgtct catacttagt ctttcatgtc caactgaagc ctgtagagat ccttatctga
8461 tgatttcttt cagatcaaaa agcgaaacta ccgaaagcgg cgaatctgtg cacgaggaag
8521 ctgagtccac catctaaatt caaagaaaaa aaaccgtcct tccatagaat aataattctc
8581 cgttgtgtgc cttgccacat ttttaaggga actatagatg aaaatctgtt tcagtacaat
8641 aaatatatac ttaatagaga aaaataaatc acaatttttt tgcttcacag aaacatggtg
8701 tatgcatttg tttccgcgag ttctggatat ttataaggac gaatagcttg cgattttcgt
8761 cctttcctag ttttaatgat tttgcagact gaaaaaagaa aagaataatt aacaattaat
8821 cttctatggt acattaaatt cattgtaaga gaaaaaaata aaatcgtaat aaaaagtaca
8881 tttataaaat ttgttatata tccattttct ccatttaaat tgtcaataat tcgtttcaac
8941 atcacaaagt aagataatgt aaattatgaa aatgtttaaa ttattattcc atcaaggaac
9001 cacaatttga atttattata cattaacgaa catagaaaga atgtttttca agactatgaa
9061 taattattat gtaatattga taagaacaag attaaatttt cacatatgct gtgatgtaac
9121 aatgtgtaac attgtggcgt cctagagccg gctctctctt atgtcataca tcacgtgaag
9181 gtatctctta cacgagtgca tcttaggaaa taaaatattt aacaaaaaca tatttcctgt
9241 gtaacacatg aaa
//