LOCUS LJ659987 1994 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68271.graph_c2_seq1.
ACCESSION LJ659987
VERSION LJ659987.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1994)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1994
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68271.graph_c2_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 661 a 389 c 417 g 527 t
ORIGIN
1 gtgtgtgtgt gtgtgtgttt gtccaacgcg cgcggcccag cctcttcgtg actgcgtgcg
61 tgcgtcgtgc ttctatttct acgttctgtt aggagtatct aggagatctc ggagcagcga
121 gccgccagga tgaccagcag tgagcaaacg cgggagcaga cgatcagcaa cgtcgagacc
181 gagtatcacg agatcaactc caagggagct tggccgattc tctatcagca tatacgtaac
241 gaatgtggaa attatgatta cacatgcaac gaatcaaaaa aaccacagaa caaaaacttg
301 aatcgctaca gggatgtggc accatatgat cacactagaa ttattcttag aagaggtgta
361 tgtgactata ttcacgccaa tctcatacaa gtggatcgtg ctcataggca atatatcctg
421 acgcaaggac ccttgccgaa tactaccggc cacttttggc taatggtatg ggagcaaaat
481 agcagagctg tattgatgtt aaataagata atcgaaaaga atcaagtcaa atgccatcaa
541 tactggcctc tggatgactc acacgaacct actatgatgt ttgaagacgt cagtttacag
601 gtggactatg tcagcaagat agaatcttca gactacacta ctaggacatt acgtataacg
661 gacttggaaa ctaacgatag tagagaaatc ttacattttc attataccac ttggccagac
721 tttggagtac cgcaatgtcc aacggccttt ttacgtttct tggcagatgt cagaaaatca
781 ggagcgttag atcaaaatgt tggcccgccc gttgtacatt gttccgcggg aataggaaga
841 tcaggaacat tttgcttggt tgacgcgtgc ttagtattga ttgaaaaata tggtttaaat
901 gatttggatg tgcgacatga attgttggaa atgagacggt ctcgtatggg tcttatacaa
961 acgcctgaac aactttgttt ttcatatgct gccatcattc agggagcaaa acaattacca
1021 cttgataaca tggataatga cgatacaact catgatgaaa taattacgag ttacgacgag
1081 atgaataata aaaatcatcc attagaaaaa gacgatgaac ctcctcctct accacctcca
1141 agaggagagt ctttaacgcg tagtatgatg gcagatctaa gcccggatga ttcatctgat
1201 aatgaagaac tagagggacc gcctgataaa ccgttgccat gtgaaccacc gaatcatgta
1261 gatttatctg cagatacaaa tctatctaca tctaatacaa attgtgtacg tgaacaaaat
1321 gctgacgatg gcgtggtact agacgacact ccttccgacg acgctgaaaa ctctgtttta
1381 ctaaacaact ctccgtccaa ttcagacgcg aaagaggagg tacgtcgacg caagatggaa
1441 aagaatgaac gactagcgac acaagtacgc gagatgaaac gccggcagaa ggagatggaa
1501 gaatggcaaa atttcaagag atcaaaaagc gaaactaccg aaagcggcga atctgtgcac
1561 gaggaagctg agtccaccat ctaaattcaa agaaaaaaaa ccgtccttcc atagaataat
1621 aattctccgt tgtgtgcctt gccacatttt taagagaact atagatcatg agaatctgtt
1681 tcagtacaat aaatatactt aatagagaaa aataaatcac aatttttttg cttcacagaa
1741 acatggtgta tgcatttgtt tccgcgagtt ctggatattt ataaggacga atagcttgcg
1801 attttcgtcc tttcctagtt ttaatgattt tgcagactga aaaaagaaaa gaataattaa
1861 caattaatct tctatggtac attaaattca ttgtaagaga aaaaaataaa atcgtaataa
1921 aaagtacatt tataaaattt gttatatatc cattttctcc atttaaattg tcaataattc
1981 gtttcaacat caca
//