LOCUS LJ655937 3340 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68677.graph_c0_seq1.
ACCESSION LJ655937
VERSION LJ655937.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3340)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3340
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68677.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1122 a 574 c 621 g 1023 t
ORIGIN
1 gaatcgttga tcgtacactc gtcaacgatt gttacaaaat ggcaggtgat aagattattg
61 actgcacgca gaacggtaac agcgagaaaa taaacgaaaa tggtgactta aatctcagtc
121 taaacctgga agatgatttc gtcgaatcga tcgaatatgt tccctgtccc gagtttcaat
181 tctcgacaat ggcatgttac atttgtaatg gatattatgg gccatgtttc gaggaaccag
241 tttgtgcaac atgtcatgca tttctattcc caaatgacgt tgatctgctc caagtgccaa
301 ttttcagtga gaaaacggat gacgaagatt cgggaaacga cgaaccaacg gatctatact
361 acaatcacga aaggagaact agtcaacagc agcaaaattc tccacagagt gtcaaccgca
421 gtatcccaaa cgcacagcag aatccgctta atcataacgc aaatgtttcg cgcagatgtt
481 atgcacaata tcaaaacgcg gtgccccagt gcaattatta cgtactccag aacaattcga
541 ccagcaattc tgtcgacaaa tgtgtgacgt ttgcacgaaa tgtgccaacg ccgcgcgatg
601 tgagtcttga tttgcagagt atggtctgta ggacgggagc agacgactgc catcagaact
661 gcatcagcag gaacgatcga aatgcgcaag atagggcgga ggcaaatccg cggagtacgc
721 cagatatgtt tgcactagat cacaacagtc aaaatgacga actcggatac aatactgtgc
781 gatatcattg gaactaccga gtatgtgagg acgcgggcga gccgtcacga ccgtacaatc
841 tgtcggaacg actggagata ttatcgaatc acaaacacat tgagcatgaa cccattaatg
901 agccaggttt agtagagaga ttgccgcccg aggtgctgct tgctatcttc tcgcatcttg
961 atgacatcag tctgtggtcg gcggcgaacg tctgtcgacg atggtgcggt ctgctgtcga
1021 cacatgttac gcagctacaa tggaagcgac acgtgaaatt acgctggccc ctctataagc
1081 ccattggctg tgttcaaaat tggtacaagg tgtacgacta tctagcctca tcagcaccat
1141 gccggacttg cttggcacag acttctctgc gatcaagacc acccaggatg gaggagaact
1201 cctggcgaag aaacagacta cgcagcgaac tgaaaagttt gagaattgat ccaccagaag
1261 gcatcgaggc gatgcctctc gatcatatgt gctgccattg gcaagccacc attacgggac
1321 cagtaggaag tccatacgag ggaggattgt tttatctgta tctacaggtt ccattcagct
1381 atcctatgtg cccacccgta gtgagatttc taacgaaaat acttcacccg aatgtatcga
1441 gacacgggga cgttggcata gactcgatac atcataattg gtcattagct ctcacaatat
1501 caaaagttct tatcagtgta caaagtctgc ttacagatcc atattgtcag gtatgtatgg
1561 aaccagaact tggagagatg tatctgaatg atcgtgagaa attcgaggaa gtggcaagag
1621 catggacgtg gaggtacgcg atgcacgatg ttgtaacgcc attttagtgc acatggaatg
1681 tataaatcac aatctatata attactgtgt aagttgtgta attacaccag atattaatta
1741 gaacataaat aagctataaa atatttaaca taaattgata atgagatttg tgatatattg
1801 tgctaaaaaa aaaacaaaat ctaccaagaa cgactgtata tatttataag aattatttgt
1861 taatcacgtg tactagcaaa attacaattg aatctttttt tatctaagag ttcattataa
1921 aatgtattaa tattcttaat gttgttactt taattgttac gttcctcatg aaataattta
1981 aaatcaatta tataatattg tatacagagt gtctcgaatt aaaactttgt gtggggaatt
2041 aataaactaa aaaaaagttc tttagtgaat tgttcgtttt ggctatgttt tagagaaaat
2101 cacaaaaatt tttgtttttc ttatttagta tttacactaa gtccatatat aattttttga
2161 ttaacaattt ctcttgtaaa tgtaatttta tcttttcata ttatttttat agaaataaat
2221 cattattcta aaacgactta aaaaacgaat tgttaaaatc caatctttcg atatcctgag
2281 atatgtatag taaatttaag aatggtaccg acagtgcaat acgagttata ctaaatgcaa
2341 cacttatttt gctacaagaa gtcatcattt tgaacatctt tattaaagaa taacagagaa
2401 taaataagta ataaagtaca aaataaaaat ttatttttgc aattttcccc aaaacaaagc
2461 aaaaacgacc aaatttttaa aggacatttt ttgatttact aatcccgtac acactttcga
2521 aaacttgata tttaaattcg agtttgtata atattctttg taatggccta atttacaccg
2581 gtcatttgat acgcatatca agcactatat tcatattaaa ttaacttaat tcaaatggtg
2641 taaatggtaa tgtgccagcc tgatacaata catatcgaaa aaatgtatca aatcaaatta
2701 gtatgtataa cacataactc tgtaaacact tgcgtattaa tcgatttagg ttctcttcaa
2761 gtgtcttcta tactgacagt gaatatgtgt gaatctgtgt tccttggaac tttctttcta
2821 tttattaact caatttattt gatgttattc aatgtacaca catttaaatt aaacttttag
2881 tgcgaaccat cttgatttgc gtattaaaaa agcggtgaat aaactaggac agtatataat
2941 atacaggtgg tcttccatat ttcttcttaa agatgtatgt atttctgtgg tagtttaaga
3001 gacgaaaata ctaataacaa atattgaagt tataatactt ttaaaattat aattataaac
3061 gattaatgtt tatcagtttt tgcctcgaca ttttttgtat tagaactttt gtttttaaat
3121 taatttgtct taaattacct taggatatac aggattttaa agaagaaatg tgcgtgagaa
3181 tggtataaca ccttatatat attccatgct ttttattaca tgtgcgtgcg tgcgtgcgta
3241 tgtatatatt agggtatgta tttggatagt aactagttaa aaaattaaaa attgaataat
3301 aaaattaaga agtcaataac ttttaaaaaa aaaaaaaaaa
//