LOCUS LJ652287 658 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq44.
ACCESSION LJ652287
VERSION LJ652287.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 658)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..658
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq44"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 178 a 139 c 92 g 249 t
ORIGIN
1 tctctctctc tttctctctc tcactcacgc acattctttc tgtctctttt ccttgctcgc
61 ttaagcatca ttaactcttt ctttctctct cttccgattt cttttttttt tttttgacca
121 tttacactcg cgcgctcgtg ctcgtactcc tttcggcata tatttagcaa catttaaata
181 tcgtattttc cgtaataatt aatcgtaata atatgataat atataataat tataataatg
241 gtataataaa ctatctacct acgcgtgtaa ggtgtacctc ctcgtgtttc gtaaaggttt
301 gcgtacctcc ctatcgttac gagtcctaga cactcttctc gccttcgtat ttatatctgt
361 atacatatac ggatgtatat aaatgtatgt acatacacgt agcaagagga caaacaatag
421 cgtctcgttt tgcagcaata atacacagaa atacgtcttc ctagaacttt atacaacacc
481 gccgttggtg gagttagtac ttttgcttgt ttgtagctta atatattccc acaatcgtta
541 cctatcaaca ctaagatatt ttaaaaattt actcgttaaa tattaatcaa gtcgttgtat
601 gctagacgaa tgttgagatc aaagaaattg cggattccag gatgtcaatg attttttt
//