LOCUS LJ652283 3069 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq40.
ACCESSION LJ652283
VERSION LJ652283.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3069)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3069
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq40"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1014 a 637 c 748 g 670 t
ORIGIN
1 ttaatctgct cgattgtttt tatttttaac atataagcaa aatgcgatta ttcgataaca
61 tgaaagaaat attgataatg agaaattaca gtttgatgca ttactataaa tttatactct
121 ctttctttca tgtatatttt cttctcactc tttgcaagat taattcttca ttagtacatt
181 tcacaatctt attacaaatt tgataatata gtttacaaag cataaagaca caagataaat
241 ttacaaattt gaaagtctct caggtttttg ataaagatgc aattagaagt atatttattg
301 attatgaaaa tccgaaaaaa ttgcttttaa tatcgagata ataataatta tcttataatc
361 aaaataagaa tttagaggca agttaaactt gaaaaatata aattgaagaa ttttcattta
421 taaaaaaatt catcatttta tctaatagat ttaacaaaat ctcatagctc tcttaactct
481 caatcgagat taattgatgg aataattgat acttaaaaat tcgctcgatt ttcaaatttt
541 cccttgaata tttacattca aagaagaatt atttatgcgc ctactacaag gctacactgt
601 aaaactcacc catcaatctc acggatgaac atttactcga gggttgagag acgcaatgat
661 ccaacgccgg gcgtttcgta atataaacat ttttcttatt caaacgtatg ttcttacatt
721 tacacagtac aaaaaattat actcagacct gccggcccgc ggttcataac tgctatgact
781 gggggcggcc ggtggttgat agaagggagc ttaggaaaag tagataggta ggtaagtagg
841 taaaggatgg aactttttcg gggatggata tatatctcgc ataggactcg aaggtctgta
901 cattgttata ctatccattc gactccgccc ccaatgcacg gccccatgtt ctctcaatct
961 gtcacatttt caccggatta ccacacacgc acatgcaatc tttttctctc ctctctctct
1021 ctctctttct ctctttccct cgcgatatca ccccggctga gacacccccg tgataaccat
1081 ctgcacgcgt gcacatacgt ccacgtacac acgctcgcgc acgcacacac acgcgcgcgc
1141 attcgtccac acgcattgac accaccccga gtcgctttaa acagccgcca acatgtctga
1201 cgacgaggaa caatactcgg gtagggcgtc ccaaaaggaa tctggcgaga atcccgagtt
1261 tatgaagagg caagaacaga aaagaagcga ccttgacgaa cagctcaaag aatacatagc
1321 ggaatggcga aagcagagag ccaaggagga agaggagttg aagagattaa aggagaagca
1381 agccaagcgc aaggtcaccc gcgcggacga ggagaagaga ttggctcaga agaagaagga
1441 agaggaggaa cgtcgccaac gtgaaatcga ggaaaagaaa caacgtgaca tcgaagagaa
1501 gagaaggcgc ttggaggaat cggaaaagaa gcgacaggct atgatgcaag cgatgaaaga
1561 tcaagcgaac aaagccaagg gtccaaactt taccattacc aagaaggatt tggcggtggg
1621 tagaatcgag tatatatatt tttttaaatt atctgcaaca acttgatgca aattctttgt
1681 acgcgcaggg taatctttca tcggcgcaac ttgagcgtaa caagacgaag gagcagctcg
1741 aggaagagaa gaaaatctcc ctcagcattc gcatcaaacc gttggagatc gaaaatctga
1801 acattgacaa gctccgtact aaggctaccg aattgtggga ggctatagtc aaacttgaaa
1861 ccgaaaagta cgatctggag gagcgacaga agcgtcagga ttacgatctt aaagagctga
1921 aggaacgtca gaaacaacaa ctgaggcaca aagccttgaa gaagggtctc gatcccgagg
1981 ctttaactgg caaatatccc ccgaaaatcc aagttgcctc gaagtatgaa cgtcgcgtcg
2041 ataccaggtc ctacgacgac aagaagaaac ttttcgaagg cggtctgaac gaacagcaga
2101 aggagatcat ggagaagcag tgggccgaac aaaaacaaca gttcatgggt cgtcagaaga
2161 cgaagttacc taagtggttc ggtgagcgac cgggcaagaa gcctggcgat cccgagtcac
2221 cggagggcga ggaagacgtg aaggccgccg tcgacgacga cctcgaggag ccccaattcg
2281 acgaggaaga ggaggaggag gtgaaggagg aaggcgagga agaggaggag gaagaggagg
2341 aggaagagat ggagaaaggg tatgaagacg aggaggagcg cgaagtcgag tttgccagct
2401 gcggtactca gacggaagcg ccgtccggcg aactcctaca ggaggtgcag cgtctccaag
2461 aactgagagc ccgaattcag gaacgagcgg ccaagatcac aacgccgacg gccttccatc
2521 cgactgatac gtccaagatc tgtttcgacg tgtcgacaat ggactcgata gttcagctga
2581 cctcctacca ggagcgcgtt cgcgacctcg aggagagact cgaggagtac gaggaagccg
2641 agaggagctg ggaacaagag aagcggctgt cgaagcagcg ggaggaggaa ctgttggatg
2701 aaaattacaa acttacagag agaacgtact ggttggagaa cgaactgcgg actatcgtga
2761 aatgtaccct cgacgaggct gacagcggga acggagatga gacgagtgtc gtacaggaaa
2821 tgaaggacgt gggccaaaat gaacaccaag ttccagaaga tacacagaat tcgaaagatg
2881 tgcaagatca acttaaagat gcaaactgca cgcgcgctgt tcagaccatc gaaacgtatg
2941 gaaactacgt ggccacggaa tactcccgat gccaagataa aaacaactcc gaccagcaga
3001 gtttgattct gggtgctcaa tgtaatgtca cgcttgtatc cctggaggaa aaggaaaagg
3061 aaaaggaaa
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