LOCUS LJ652281 2344 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq38.
ACCESSION LJ652281
VERSION LJ652281.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2344)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2344
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq38"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 737 a 530 c 651 g 426 t
ORIGIN
1 tttttttttt ttttttttcg taatataaac attttttttt tcttattcaa acgtatggtt
61 cttacattta cacagtacaa aaaattatac tcagacctgc cggcccgcgg ttcataactg
121 ctatgactgg gggcggccgg tggttgatag aagggagctt aggaaaagta gataggtagg
181 taagtaggta aaggatggaa ctttttcggg gatggatata tatctcgcat aggactcgaa
241 ggtctgtaca ttgttatact atccattcga ctccgccccc aatgcacggc cccatgttct
301 ctcaatctgt cacattttca ccggattacc acacacgcac atgcaatctt tttctctcct
361 ctctctctct ctctttctct ctttccctcg cgatatcacc ccggctgaga cacccccgtg
421 ataaccatct gcacgcgtgc acatacgtcc acgtacacac gctcgcgcac gcacacacac
481 gcgcgcgcat tcgtccacac gcattgacac caccccgagt cgctttaaac agccgccaac
541 atgtctgacg acgaggaaca atactcgggt agggcgtccc aaaaggaatc tggcgagaat
601 cccgagttta tgaagaggca agaacagaaa agaagcgacc ttgacgaaca gctcaaagaa
661 tacatagcgg aatggcgaaa gcagagagcc aaggaggaag aggagttgaa gagattaaag
721 gagaagcaag ccaagcgcaa ggtcacccgc gcggacgagg agaagagatt ggctcagaag
781 aagaaggaag aggaggaacg tcgccaacgt gaaatcgagg aaaagaaaca acgtgacatc
841 gaagagaaga gaaggcgctt ggaggaatcg gaaaagaagc gacaggctat gatgcaagcg
901 atgaaagacc agagcaaagc gaagggtcca aactttacca tcaccaagaa agatgctctt
961 gcgggtaatc ttacatcggc gcaactcgag cgtaataaga cgaaagagca gctcgaagag
1021 gagaagaaga tctcccttag cattcgcatc aagcctttgg aaatcgaagg tctgtccatt
1081 gacaagctcc gtactaaggc taccgaattg tgggaggcca tagttaaact tgaaaccgaa
1141 aagtacgatt tggaagagcg acaaaagcgt caagattacg atcttaaaga gctgaaggaa
1201 cgtcagaaac aacaactgag gcacaaagcc ttgaagaagg gtctcgatcc cgaggcttta
1261 actggcaaat atcccccgaa aatccaagtt gcctcgaagt atgaacgtcg cgtcgatacc
1321 aggtcctacg acgacaagaa gaaacttttc gaaggcggtc tgaacgaaca gcagaaggag
1381 atcatggaga agcagtgggc cgaacaaaaa caacagttca tgggtcgtca gaagacgaag
1441 ttacctaagt ggttcggtga gcgaccgggc aagaagcctg gcgatcccga gtcaccggag
1501 ggcgaggaag acgtgaaggc cgccgtcgac gacgacctcg aggagcccca attcgacgag
1561 gaagaggagg aggaggtgaa ggaggaaggc gaggaagagg aggaggaaga ggaggaggaa
1621 gagatggaga aagggtatga agacgaggag gagcgcgaag tcgagtttgc cagctgcggt
1681 actcagacgg aagcgccgtc cggcgaactc ctacaggagg tgcagcgtct ccaagaactg
1741 agagcccgaa ttcaggaacg agcggccaag atcacaacgc cgacggcctt ccatccgact
1801 gatacgtcca agatctgttt cgacgtgtcg acaatggact cgatagttca gctgacctcc
1861 taccaggagc gcgttcgcga cctcgaggag agactcgagg agtacgagga agccgagagg
1921 agctgggaac aagagaagcg gctgtcgaag cagcgggagg aggaactgtt ggatgaaaat
1981 tacaaactta cagagagaac gtactggttg gagaacgaac tgcggactat cgtgaaatgt
2041 accctcgacg aggctgacag cgggaacgga gatgagacga gtgtcgtaca ggaaatgaag
2101 gacgtgggcc aaaatgaaca ccaagttcca gaagatacac agaattcgaa agatgtgcaa
2161 gatcaactta aagatgcaaa ctgcacgcgc gctgttcaga ccatcgaaac gtatggaaac
2221 tacgtggcca cggaatactc ccgatgccaa gataaaaaca actccgacca gcagagtttg
2281 attctgggtg ctcaatgtaa tgtcacgctt gtatccctgg aggaaaagga aaaggaaaag
2341 gaaa
//