LOCUS LJ652277 2138 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq34.
ACCESSION LJ652277
VERSION LJ652277.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2138)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2138
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq34"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 674 a 496 c 634 g 334 t
ORIGIN
1 cgcagagtac atggggagag cggctcaggc tgtcgcggac tccacattcc accgggataa
61 gctcctcctg tgcgtgtgcg tgtctctctc tttctctctc gtccccctgc ggagggtgcg
121 gaaccccgtc tctctctctc tttctctctt tccctcgcga tatcaccccg gctgagacac
181 ccccgtgata accatctgca cgcgtgcaca tacgtccacg tacacacgct cgcgcacgca
241 cacacacgcg cgcgcattcg tccacacgca ttgacaccac cccgagtcgc tttaaacagc
301 cgccaacatg tctgacgacg aggaacaata ctccgaggag gaggaagtcg aggaagtgaa
361 gggtagggcg tcccaaaagg aatctggcga gaatcccgag tttatgaaga ggcaagaaca
421 gaaaagaagc gaccttgacg aacagctcaa agaatacata gcggaatggc gaaagcagag
481 agccaaggag gaagaggagt tgaagagatt aaaggagaag caagccaagc gcaaggtcac
541 ccgcgcggac gaggagaaga gattggctca gaagaagaag gaagaggagg aacgtcgcca
601 acgtgaaatc gaggaaaaga aacaacgtga catcgaagag aagagaaggc gcttggagga
661 atcggaaaag aagcgacagg ctatgatgca agcgatgaaa gatcaagcga acaaagccaa
721 gggtccaaac tttaccatta ccaagaagga tttggcgggt aatctttcat cggcgcaact
781 tgagcgtaac aagacgaagg agcagctcga ggaagagaag aaaatctccc tcagcattcg
841 catcaaaccg ttggagatcg aaaatctgaa cattgacaag ctccgtacta aggctaccga
901 attgtgggag gctatagtca aacttgaaac cgaaaagtac gatctggagg agcgacagaa
961 gcgtcaggat tacgatctta aagagctgaa ggaacgtcag aaacaacaac tgaggcacaa
1021 agccttgaag aagggtctcg atcccgaggc tttaactggc aaatatcccc cgaaaatcca
1081 agttgcctcg aagtatgaac gtcgcgtcga taccaggtcc tacgacgaca agaagaaact
1141 tttcgaaggc ggtctgaacg aacagcagaa ggagatcatg gagaagcagt gggccgaaca
1201 aaaacaacag ttcatgggtc gtcagaagac gaagttacct aagtggttcg gtgagcgacc
1261 gggcaagaag cctggcgatc ccgagtcacc ggagggcgag gaagacgtga aggccgccgt
1321 cgacgacgac ctcgaggagc cccaattcga cgaggaagag gaggaggagg tgaaggagga
1381 aggcgaggaa gaggaggagg aagaggagga ggaagagatg gagaaagggt atgaagacga
1441 ggaggagcgc gaagtcgagt ttgccagctg cggtactcag acggaagcgc cgtccggcga
1501 actcctacag gaggtgcagc gtctccaaga actgagagcc cgaattcagg aacgagcggc
1561 caagatcaca acgccgacgg ccttccatcc gactgatacg tccaagatct gtttcgacgt
1621 gtcgacaatg gactcgatag ttcagctgac ctcctaccag gagcgcgttc gcgacctcga
1681 ggagagactc gaggagtacg aggaagccga gaggagctgg gaacaagaga agcggctgtc
1741 gaagcagcgg gaggaggaac tgttggatga aaattacaaa cttacagaga gaacgtactg
1801 gttggagaac gaactgcgga ctatcgtgaa atgtaccctc gacgaggctg acagcgggaa
1861 cggagatgag acgagtgtcg tacaggaaat gaaggacgtg ggccaaaatg aacaccaagt
1921 tccagaagat acacagaatt cgaaagatgt gcaagatcaa cttaaagatg caaactgcac
1981 gcgcgctgtt cagaccatcg aaacgtatgg aaactacgtg gccacggaat actcccgatg
2041 ccaagataaa aacaactccg accagcagag tttgattctg ggtgctcaat gtaatgtcac
2101 gcttgtatcc ctggaggaaa aggaaaagga aaaggaaa
//