LOCUS LJ652275 2581 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq32.
ACCESSION LJ652275
VERSION LJ652275.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2581)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2581
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq32"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 813 a 524 c 580 g 664 t
ORIGIN
1 tctctctctc tttctctctc tcactcacgc acattctttc tgtctctttt ccttgctcgc
61 ttaagcatca ttaactcttt ctttctctct cttccgattt cttttttttt tttttgacca
121 tttacactcg cgcgctcgtg ctcgtactcc tttcggcata tctctcaatc tgtcacattt
181 tcaccggatt accacacacg cacatgcaat ctttttctct cctctctctc tctctctttc
241 tctctttccc tcgcgatatc accccggctg agacaccccc gtgataacca tctgcacgcg
301 tgcacatacg tccacgtaca cacgctcgcg cacgcacaca cacgcgcgcg cattcgtcca
361 cacgcattga caccaccccg agtcgcttta aacagccgcc aacatgtctg acgacgagga
421 acaatactcc gaggaggagg aagtcgagga agtgaagcag ccggagaaga agaccgaggg
481 tagggcgtcc caaaaggaat ctggcgagaa tcccgagttt atgaagaggc aagaacagaa
541 aagaagcgac cttgacgaac agctcaaaga atacatagcg gaatggcgaa agcagagagc
601 caaggaggaa gaggagttga agagattaaa ggagaagcaa gccaagcgca aggtcacccg
661 cgcggacgag gagaagagat tggctcagaa gaagaaggaa gaggaggaac gtcgccaacg
721 tgaaatcgag gaaaagaaac aacgtgacat cgaagagaag agaaggcgct tggaggaatc
781 ggaaaagaag cgacaggcta tgatgcaagc gatgaaagat caagcgaaca aagccaaggg
841 tccaaacttt accattacca agaaggattt ggcggtgggt agaatcgagt atatatattt
901 ttttaaatta tctgcaacaa cttgatgcaa attctttgta cgcgcagggt aatctttcat
961 cggcgcaact tgagcgtaac aagacgaagg agcagctcga ggaagagaag aaaatctccc
1021 tcagcattcg catcaaaccg ttggagatcg aaaatctgaa cattgacaag ctccgtacta
1081 aggctaccga attgtgggag gctatagtca aacttgaaac cgaaaagtac gatctggagg
1141 agcgacagaa gcgtcaggat tacgatctta aagagctgaa ggaacgtcag aaacaacaac
1201 tgaggcacaa agccttgaag aagggtctcg atcccgaggc tttaactggc aaatatcccc
1261 cgaaaatcca agttgcctcg aagtatgaac gtcgcgtcga taccaggtcc tacgacgaca
1321 agaagaaact tttcgaaggc ggtctgaacg aacagcagaa ggagatcatg gagaagcagt
1381 gggccgaaca aaaacaacag ttcatgggtc gtcagaagac gaagttacct aagtggttcg
1441 gtgagcgacc gggcaagaag cctggcgatc ccgagtcacc ggagggcgag gaagacgtga
1501 aggccgccgt cgacgacgac ctcgaggagc cccaattcga cgaggaagag gaggaggagg
1561 tgaaggagga aggcgaggaa gaggaggagg aagaggagga ggaagaggat atctttgatg
1621 ggattttttt cggctcactc cgcaaacgcg cgtgtcgctt cgttctgtag actccgttct
1681 gtagactccg atgcaaatca aactggagaa agatgaaact cctctatttt atctgttgag
1741 gttcctttgt tcattgtatt atcaaactta gtcccgtaga aagatatgtg aataatcagt
1801 cgagttaata atgaacgcaa caatatgtct cgtttctttc tcttcctctc ttcctttttt
1861 ttcttccttt tttttccggg caagtgatta tttcaacaga aacgagaaag taactgcgtg
1921 atcaagtccc tggatatacg tatttctttt tttaactgct ttcttttctc taacgtcaca
1981 aaagattcta tacgcattaa gagcttatgt aatcaatcca gttacgttgt tcacctgatt
2041 tatctgcttt gcaatgtctt tctcgaataa caatgataat ataatgatag tagtagtact
2101 agtaataata ataataatat aataataata tatggaagac tgaattgtct aaatgtcaag
2161 taatatcgtc taaatattgt aatttgagat ttgtccgttt taaaattatt ttatatgata
2221 tagaaaaatt gtgtaaaatt taatattaat attgtcacca ttaaaagtaa atttaaaaat
2281 ttgtttagat tttggtaaga atttaggaat ttgttatatg taaatcattt tcttaattgt
2341 ttatatgatt aatgaagatg attccttacg gagtgccatt aagactaagc agtcaatggg
2401 caatcctcta atattattat atcatcacga ttacttaaga ggacctggat cggaataact
2461 attatagggt acaaaattct ctgaattggc aacagtattg aaaacttatg tgtttaaaat
2521 acaagaataa gtgagacact caacttgagc ttaaaaatag agagagaaag agagagagaa
2581 a
//