LOCUS LJ652273 1428 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq30.
ACCESSION LJ652273
VERSION LJ652273.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1428)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1428
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq30"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 444 a 343 c 394 g 247 t
ORIGIN
1 cgcagagtac atggggagag cggctcaggc tgtcgcggac tccacattcc accgggataa
61 gctcctcctg tgcgtgtgcg tgtctctctc tttctctctc gtccccctgc ggagggtgcg
121 gaaccccgtc tctctctctc tttctctctt tccctcgcga tatcaccccg gctgagacac
181 ccccgtgata accatctgca cgcgtgcaca tacgtccacg tacacacgct cgcgcacgca
241 cacacacgcg cgcgcattcg tccacacgca ttgacaccac cccgagtcgc tttaaacagc
301 cgccaacatg tctgacgacg aggaacaata ctccgaggag gaggaagtcg aggaagtgaa
361 gggtagggcg tcccaaaagg aatctggcga gaatcccgag tttatgaaga ggcaagaaca
421 gaaaagaagc gaccttgacg aacagctcaa agaatacata gcggaatggc gaaagcagag
481 agccaaggag gaagaggagt tgaagagatt aaaggagaag caagccaagc gcaaggtcac
541 ccgcgcggac gaggagaaga gattggctca gaagaagaag gaagaggagg aacgtcgcca
601 acgtgaaatc gaggaaaaga aacaacgtga catcgaagag aagagaaggc gcttggagga
661 atcggaaaag aagcgacagg ctatgatgca agcgatgaaa gatcaagcga acaaagccaa
721 gggtccaaac tttaccatta ccaagaagga tttggcggtg ggtagaatcg agtatatata
781 tttttttaaa ttatctgcaa caacttgatg caaattcttt gtacgcgcag ggtaatcttt
841 catcggcgca acttgagcgt aacaagacga aggagcagct cgaggaagag aagaaaatct
901 ccctcagcat tcgcatcaaa ccgttggaga tcgaaaatct gaacattgac aagctccgta
961 ctaaggctac cgaattgtgg gaggctatag tcaaacttga aaccgaaaag tacgatctgg
1021 aggagcgaca gaagcgtcag gattacgatc ttaaagagct gaaggaacgt cagaaacaac
1081 aactgaggca caaagccttg aagaagggtc tcgatcccga ggctttaact ggcaaatatc
1141 ccccgaaaat ccaagttgcc tcgaagtatg aacgtcgcgt cgataccagg tcctacgacg
1201 acaagaagaa actcttcgaa ggtggtctga ccgagcagct aaaggagtcc atggagaaac
1261 agtggaccca acagaaggaa cagttcttgg gtcgccagaa gacgaaatta cctaagtggt
1321 tcggcgagcg acctggcaaa aagcctggtg atcccgagtc tccggagggc gaagaggacg
1381 taaaggccgc cgtcgacgac gaccttgagg aaccgcaatt tgaagagg
//