LOCUS LJ652269 2307 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq26.
ACCESSION LJ652269
VERSION LJ652269.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2307)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2307
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq26"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 711 a 538 c 629 g 429 t
ORIGIN
1 tctctctctc tttctctctc tcactcacgc acattctttc tgtctctttt ccttgctcgc
61 ttaagcatca ttaactcttt ctttctctct cttccgattt cttttttttt tttttgacca
121 tttacactcg cgcgctcgtg ctcgtactcc tttcggcata tctctcaatc tgtcacattt
181 tcaccggatt accacacacg cacatgcaat ctttttctct cctctctctc tctctctttc
241 tctctttccc tcgcgatatc accccggctg agacaccccc gtgataacca tctgcacgcg
301 tgcacatacg tccacgtaca cacgctcgcg cacgcacaca cacgcgcgcg cattcgtcca
361 cacgcattga caccaccccg agtcgcttta aacagccgcc aacatgtctg acgacgagga
421 acaatactcc gaggaggagg aagtcgagga agtgaagggt agggcgtccc aaaaggaatc
481 tggcgagaat cccgagttta tgaagaggca agaacagaaa agaagcgacc ttgacgaaca
541 gctcaaagaa tacatagcgg aatggcgaaa gcagagagcc aaggaggaag aggagttgaa
601 gagattaaag gagaagcaag ccaagcgcaa ggtcacccgc gcggacgagg agaagagatt
661 ggctcagaag aagaaggaag aggaggaacg tcgccaacgt gaaatcgagg aaaagaaaca
721 acgtgacatc gaagagaaga gaaggcgctt ggaggaatcg gaaaagaagc gacaggctat
781 gatgcaagcg atgaaagatc aagcgaacaa agccaagggt ccaaacttta ccattaccaa
841 gaaggatttg gcggtgggta gaatcgagta tatatatttt tttaaattat ctgcaacaac
901 ttgatgcaaa ttctttgtac gcgcagggta atctttcatc ggcgcaactt gagcgtaaca
961 agacgaagga gcagctcgag gaagagaaga aaatctccct cagcattcgc atcaaaccgt
1021 tggagatcga aaatctgaac attgacaagc tccgtactaa ggctaccgaa ttgtgggagg
1081 ctatagtcaa acttgaaacc gaaaagtacg atctggagga gcgacagaag cgtcaggatt
1141 acgatcttaa agagctgaag gaacgtcaga aacaacaact gaggcacaaa gccttgaaga
1201 agggtctcga tcccgaggct ttaactggca aatatccccc gaaaatccaa gttgcctcga
1261 agtatgaacg tcgcgtcgat accaggtcct acgacgacaa gaagaaactt ttcgaaggcg
1321 gtctgaacga acagcagaag gagatcatgg agaagcagtg ggccgaacaa aaacaacagt
1381 tcatgggtcg tcagaagacg aagttaccta agtggttcgg tgagcgaccg ggcaagaagc
1441 ctggcgatcc cgagtcaccg gagggcgagg aagacgtgaa ggccgccgtc gacgacgacc
1501 tcgaggagcc ccaattcgac gaggaagagg aggaggaggt gaaggaggaa ggcgaggaag
1561 aggaggagga agaggaggag gaagagatgg agaaagggta tgaagacgag gaggagcgcg
1621 aagtcgagtt tgccagctgc ggtactcaga cggaagcgcc gtccggcgaa ctcctacagg
1681 aggtgcagcg tctccaagaa ctgagagccc gaattcagga acgagcggcc aagatcacaa
1741 cgccgacggc cttccatccg actgatacgt ccaagatctg tttcgacgtg tcgacaatgg
1801 actcgatagt tcagctgacc tcctaccagg agcgcgttcg cgacctcgag gagagactcg
1861 aggagtacga ggaagccgag aggagctggg aacaagagaa gcggctgtcg aagcagcggg
1921 aggaggaact gttggatgaa aattacaaac ttacagagag aacgtactgg ttggagaacg
1981 aactgcggac tatcgtgaaa tgtaccctcg acgaggctga cagcgggaac ggagatgaga
2041 cgagtgtcgt acaggaaatg aaggacgtgg gccaaaatga acaccaagtt ccagaagata
2101 cacagaattc gaaagatgtg caagatcaac ttaaagatgc aaactgcacg cgcgctgttc
2161 agaccatcga aacgtatgga aactacgtgg ccacggaata ctcccgatgc caagataaaa
2221 acaactccga ccagcagagt ttgattctgg gtgctcaatg taatgtcacg cttgtatccc
2281 tggaggaaaa ggaaaaggaa aaggaaa
//