LOCUS LJ652267 3966 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq24.
ACCESSION LJ652267
VERSION LJ652267.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3966)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3966
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq24"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1126 a 871 c 963 g 1006 t
ORIGIN
1 cacacaggaa agcagtggta tcgtgaccca ggtgaagatg cccaaaactt tacatttcgc
61 gtcattgcaa acggccctga agaaacctga gtttgtcatc acagactttg gtaaattcga
121 ctatccggaa cagctacatc tagctttcct gacgctgcat caatacatag ccaatagagg
181 tacattgcca cggccgtgga accagtcgga tgctgacgag tttatcgcca ttattgaaca
241 gatcaaggac aactacggtt ttgatactga gattaacaat gagttgttac gtacgtttgc
301 caaggtgtcc gctggcgatt tgaaccccat gaacgccacg attggcggta ttgttgccca
361 ggaagtgatg aaagcctgct ccggcaagtt ccatcctatc tatcaatggt tatactttga
421 cgccatcgaa tgtctgcccg ttgaccgctc agagcttacc gaggaggatt gctgtgctac
481 gggatctcgt tatgattctc aggtggctgt ttttggtaag aatttccagt ccaagatcgg
541 cagtttgaaa tactttgtgg tcggtgccgg cgcaattggt tgtgaattat tgaaaaactt
601 cgcgatgatt ggcgttggag cggagaacgg ttgtgtcacg gttacggata tggacttgat
661 cgagaaatcc aatttgaatc gacagtttct gttcaggccg tcagatgtgc agcaatctaa
721 gtcgtcgacg gcggccagag tcatcaaggg catgaatccc gacatgaagg tggtcgcgca
781 cgagaatcgg gtgtgtccgg agacagagaa gatctataac gatgatttct tcgaagtact
841 ggacggtgtg gcaaatgcac tcgataacgt aaacgctcgt atttacatgg atcgtcgttg
901 cgtatactat cgtaaacccc tattggaatc tggtacgctt ggcactaaag gcaacaccca
961 agtggtggtg ccgttcctca ctgaatcata cagttcgtcg caggacccac cggaaaagag
1021 cattcctatc tgtactctca aaaatttccc caatgctatt gaacatactc tacaatgggc
1081 tcgcgacacc ttcgaaggcc tgttccgtca atctgcggag aatgcagcgc agcatatttc
1141 cgacccgcag tttgtcgaac gaacgctcaa gctgcccggt gtgcagcccc ttgaggtttt
1201 agaatctgtt aagatagcgc tagtcgacga gaggccgaac aactttgctg attgtgtggc
1261 atgggctcgt tgccactggc aagaacaata tagcaatcaa atccgtcaac tgttattcaa
1321 ctttccaccg gatcaggtga cctcgagcgg tcagcctttc tggtctggcc cgaaacgctg
1381 tccagatccg ttagttttcg atgtcaacga ctccctacat atggattaca ttgttgccgc
1441 tgccaatctc aaggctaaag tttacggaat acccacgaat cgtgatagag aagagatcgc
1501 taggatcctt gccactgtca aagtaccaga cttcacaccc aaatccggcg tgaagatcgc
1561 tgaaacagac tcacaggtgc aagtgtcaaa cggcagtggt aacatcgacc atgaacgact
1621 gtcgcagctg caggaagagc tgccgaagat ggaggatctg aacagcatgg tgatttaccc
1681 acaggaattt gaaaaagacg acgacaccaa tttccacata gacttcattg ttgcggcatc
1741 gaatttgcgt gctaccaact acaaaatctc gccggcggat cggcataaga gcaaactaat
1801 cgctggcaag attattccag cgattgcaac taccacttcg gtggtagctg gtctcgtctg
1861 tctggaactg tacaagctga cgcgcggagt tcgtgacttg tcgctttaca agaacggctt
1921 tgtgaacctg gcgctaccgt tcttcggttt cagcgaaccg attgctgctc ccaagctcaa
1981 gtactacgac atcgagtgga cattgtggga tcgttttgaa gtaaaaggcg aattaacatt
2041 gaaggaattc cttgactact tcaaagaacg tcacaatctg gaagtgacaa tgttatcgca
2101 aggtatctgc atgctgtact cgttcttcat ggcgaagctc aagtgccaag agcgtatggg
2161 cctgctcatg tcagaggtgg tgaagaaggt gtcgaagaag aagttggagc cacatgtgcg
2221 cgctctcgtg ttcgagctgt gctgcaacga cgaggacggg aacgacgtcg aagtgccgta
2281 tgtgcgctac actctaccct gactcgcccg cgtggccctc gatcgcgtca gatgatgtct
2341 acttaactga gacacttagc cgtacatagt gatttctaca aatttctatt ttacgacgat
2401 gtaatacata caggagacat tactgctact gtcctcgtct atgaatgtct atatgaggca
2461 cactttcttt ctacatatat acatatttct ttttttttgc tgtcagagat gcaatttctc
2521 acgttactac cgccagcgct tagtagtagt gattttgagc agcgagtgcg cgcaatagca
2581 aaatcggatt cttcgtttta tttagggaat aacatttgca aataattttg gacaccaggt
2641 tttttcgatt agttatcacg aacataccgg attatgatat cagaagtata aaattgtacc
2701 ttttttaatt gtttttcact caaattaaca tcgaatatcc gatttcctta tttctatgaa
2761 acatttcatg gtcaaattct ttttttttta tagagataat atggataata ttaaaacaat
2821 agatagcaat aataagaaaa aaaaaaatta attcatgatg tatcgtgaac ttgctattta
2881 agtcaaatta atgaactata gacagtgtag actcgttaat ttattaagtt ctaaaaagtt
2941 atatttgcgt atacacacaa atttctcact atttccaaat ttatatcttg atacaagtga
3001 aaatagatcg gtttctcact tctctgatgt cataatccga tatacacaat cgcaacaagc
3061 aaatctgcgg agtctttcgc ttctcggcta aattcaattt tcgtctttca ctcgagtggt
3121 attttatttt gaccggtttg ctcgcgatgc gttccaacac gattgcgatt gaatagggga
3181 aaagaaagaa gagaaaatag aagcgaatac caaatttcta cgaggaggaa gaggaggagg
3241 aagagatgga gaaagggtat gaagacgagg aggagcgcga agtcgagttt gccagctgcg
3301 gtactcagac ggaagcgccg tccggcgaac tcctacagga ggtgcagcgt ctccaagaac
3361 tgagagcccg aattcaggaa cgagcggcca agatcacaac gccgacggcc ttccatccga
3421 ctgatacgtc caagatctgt ttcgacgtgt cgacaatgga ctcgatagtt cagctgacct
3481 cctaccagga gcgcgttcgc gacctcgagg agagactcga ggagtacgag gaagccgaga
3541 ggagctggga acaagagaag cggctgtcga agcagcggga ggaggaactg ttggatgaaa
3601 attacaaact tacagagaga acgtactggt tggagaacga actgcggact atcgtgaaat
3661 gtaccctcga cgaggctgac agcgggaacg gagatgagac gagtgtcgta caggaaatga
3721 aggacgtggg ccaaaatgaa caccaagttc cagaagatac acagaattcg aaagatgtgc
3781 aagatcaact taaagatgca aactgcacgc gcgctgttca gaccatcgaa acgtatggaa
3841 actacgtggc cacggaatac tcccgatgcc aagataaaaa caactccgac cagcagagtt
3901 tgattctggg tgctcaatgt aatgtcacgc ttgtatccct ggaggaaaag gaaaaggaaa
3961 aggaaa
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