LOCUS LJ652263 2417 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq20.
ACCESSION LJ652263
VERSION LJ652263.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2417)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2417
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq20"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 760 a 539 c 667 g 451 t
ORIGIN
1 tttttttttt ttttttttcg taatataaac attttttttt tcttattcaa acgtatggtt
61 cttacattta cacagtacaa aaaattatac tcagacctgc cggcccgcgg ttcataactg
121 ctatgactgg gggcggccgg tggttgatag aagggagctt aggaaaagta gataggtagg
181 taagtaggta aaggatggaa ctttttcggg gatggatata tatctcgcat aggactcgaa
241 ggtctgtaca ttgttatact atccattcga ctccgccccc aatgcacggc cccatgttct
301 ctcaatctgt cacattttca ccggattacc acacacgcac atgcaatctt tttctctcct
361 ctctctctct ctctttctct ctttccctcg cgatatcacc ccggctgaga cacccccgtg
421 ataaccatct gcacgcgtgc acatacgtcc acgtacacac gctcgcgcac gcacacacac
481 gcgcgcgcat tcgtccacac gcattgacac caccccgagt cgctttaaac agccgccaac
541 atgtctgacg acgaggaaca atactcgggt agggcgtccc aaaaggaatc tggcgagaat
601 cccgagttta tgaagaggca agaacagaaa agaagcgacc ttgacgaaca gctcaaagaa
661 tacatagcgg aatggcgaaa gcagagagcc aaggaggaag aggagttgaa gagattaaag
721 gagaagcaag ccaagcgcaa ggtcacccgc gcggacgagg agaagagatt ggctcagaag
781 aagaaggaag aggaggaacg tcgccaacgt gaaatcgagg aaaagaaaca acgtgacatc
841 gaagagaaga gaaggcgctt ggaggaatcg gaaaagaagc gacaggctat gatgcaagcg
901 atgaaagatc aagcgaacaa agccaagggt ccaaacttta ccattaccaa gaaggatttg
961 gcggtgggta gaatcgagta tatatatttt tttaaattat ctgcaacaac ttgatgcaaa
1021 ttctttgtac gcgcagggta atctttcatc ggcgcaactt gagcgtaaca agacgaagga
1081 gcagctcgag gaagagaaga aaatctccct cagcattcgc atcaaaccgt tggagatcga
1141 aaatctgaac attgacaagc tccgtactaa ggctaccgaa ttgtgggagg ctatagtcaa
1201 acttgaaacc gaaaagtacg atctggagga gcgacagaag cgtcaggatt acgatcttaa
1261 agagctgaag gaacgtcaga aacaacaact gaggcacaaa gccttgaaga agggtctcga
1321 tcccgaggct ttaactggca aatatccccc gaaaatccaa gttgcctcga agtatgaacg
1381 tcgcgtcgat accaggtcct acgacgacaa gaagaaactt ttcgaaggcg gtctgaacga
1441 acagcagaag gagatcatgg agaagcagtg ggccgaacaa aaacaacagt tcatgggtcg
1501 tcagaagacg aagttaccta agtggttcgg tgagcgaccg ggcaagaagc ctggcgatcc
1561 cgagtcaccg gagggcgagg aagacgtgaa ggccgccgtc gacgacgacc tcgaggagcc
1621 ccaattcgac gaggaagagg aggaggaggt gaaggaggaa ggcgaggaag aggaggagga
1681 agaggaggag gaagagatgg agaaagggta tgaagacgag gaggagcgcg aagtcgagtt
1741 tgccagctgc ggtactcaga cggaagcgcc gtccggcgaa ctcctacagg aggtgcagcg
1801 tctccaagaa ctgagagccc gaattcagga acgagcggcc aagatcacaa cgccgacggc
1861 cttccatccg actgatacgt ccaagatctg tttcgacgtg tcgacaatgg actcgatagt
1921 tcagctgacc tcctaccagg agcgcgttcg cgacctcgag gagagactcg aggagtacga
1981 ggaagccgag aggagctggg aacaagagaa gcggctgtcg aagcagcggg aggaggaact
2041 gttggatgaa aattacaaac ttacagagag aacgtactgg ttggagaacg aactgcggac
2101 tatcgtgaaa tgtaccctcg acgaggctga cagcgggaac ggagatgaga cgagtgtcgt
2161 acaggaaatg aaggacgtgg gccaaaatga acaccaagtt ccagaagata cacagaattc
2221 gaaagatgtg caagatcaac ttaaagatgc aaactgcacg cgcgctgttc agaccatcga
2281 aacgtatgga aactacgtgg ccacggaata ctcccgatgc caagataaaa acaactccga
2341 ccagcagagt ttgattctgg gtgctcaatg taatgtcacg cttgtatccc tggaggaaaa
2401 ggaaaaggaa aaggaaa
//