LOCUS LJ652257 968 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq14.
ACCESSION LJ652257
VERSION LJ652257.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 968)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..968
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq14"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 338 a 202 c 266 g 162 t
ORIGIN
1 cgcagagtac atggggagag cggctcaggc tgtcgcggac tccacattcc accgggataa
61 gctcctcctc gctttaaaca gccgccaaca tgtctgacga cgaggaacaa tactcgggta
121 gggcgtccca aaaggaatct ggcgagaatc ccgagtttat gaagaggcaa gaacagaaaa
181 gaagcgacct tgacgaacag ctcaaagaat acatagcgga atggcgaaag cagagagcca
241 aggaggaaga ggagttgaag agattaaagg agaagcaagc caagcgcaag gtcacccgcg
301 cggacgagga gaagagattg gctcagaaga agaaggaaga ggaggaacgt cgccaacgtg
361 aaatcgagga aaagaaacaa cgtgacatcg aagagaagag aaggcgcttg gaggaatcgg
421 aaaagaagcg acaggctatg atgcaagcga tgaaagatca agcgaacaaa gccaagggtc
481 caaactttac cattaccaag aaggatttgg cggtgggtag aatcgagtat atatattttt
541 ttaaattatc tgcaacaact tgatgcaaat tctttgtacg cgcagggtaa tctttcatcg
601 gcgcaacttg agcgtaacaa gacgaaggag cagctcgagg aagagaagaa aatctccctc
661 agcattcgca tcaaaccgtt ggagatcgaa aatctgaaca ttgacaagct ccgtactaag
721 gctaccgaat tgtgggaggc tatagtcaaa cttgaaaccg aaaagtacga tctggaggag
781 cgacagaagc gtcaggatta cgatcttaaa gagctgaagg aacgtcagaa acaacaactg
841 aggcacaaag ccttgaagaa gggtctcgat cccgaggctt taactggcaa atatcccccg
901 aaaatccaag ttgcctcgaa gtatgaacgt cgcgtcgata ccaggtccta cgacgacaag
961 aagaaact
//