LOCUS LJ652253 1989 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq10.
ACCESSION LJ652253
VERSION LJ652253.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1989)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1989
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq10"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 648 a 431 c 602 g 308 t
ORIGIN
1 ggggcatttt ctctttctcg cctccaagta tcggattact tcgggaacgt cgggtgcgcg
61 ctgtccggcc cccattcagc ttcggctttc ctccggatac ccctttttcc acgcaagcgc
121 tttaaacagc cgccaacatg tctgacgacg aggaacaata ctccgaggag gaggaagtcg
181 aggaagtgaa gcagccggag aagaagaccg agggtagggc gtcccaaaag gaatctggcg
241 agaatcccga gtttatgaag aggcaagaac agaaaagaag cgaccttgac gaacagctca
301 aagaatacat agcggaatgg cgaaagcaga gagccaagga ggaagaggag ttgaagagat
361 taaaggagaa gcaagccaag cgcaaggtca cccgcgcgga cgaggagaag agattggctc
421 agaagaagaa ggaagaggag gaacgtcgcc aacgtgaaat cgaggaaaag aaacaacgtg
481 acatcgaaga gaagagaagg cgcttggagg aatcggaaaa gaagcgacag gctatgatgc
541 aagcgatgaa agaccagagc aaagcgaagg gtccaaactt taccatcacc aagaaagatg
601 ctcttgcggg taatcttaca tcggcgcaac tcgagcgtaa taagacgaaa gagcagctcg
661 aagaggagaa gaagatctcc cttagcattc gcatcaagcc tttggaaatc gaaggtctgt
721 ccattgacaa gctccgtact aaggctaccg aattgtggga ggccatagtt aaacttgaaa
781 ccgaaaagta cgatttggaa gagcgacaaa agcgtcaaga ttacgatctt aaagagctga
841 aggaacgtca gaaacaacaa ctgaggcaca aagccttgaa gaagggtctc gatcccgagg
901 ctttaactgg caaatatccc ccgaaaatcc aagttgcctc gaagtatgaa cgtcgcgtcg
961 ataccaggtc ctacgacgac aagaagaaac ttttcgaagg cggtctgaac gaacagcaga
1021 aggagatcat ggagaagcag tgggccgaac aaaaacaaca gttcatgggt cgtcagaaga
1081 cgaagttacc taagtggttc ggtgagcgac cgggcaagaa gcctggcgat cccgagtcac
1141 cggagggcga ggaagacgtg aaggccgccg tcgacgacga cctcgaggag ccccaattcg
1201 acgaggaaga ggaggaggag gtgaaggagg aaggcgagga agaggaggag gaagaggagg
1261 aggaagagat ggagaaaggg tatgaagacg aggaggagcg cgaagtcgag tttgccagct
1321 gcggtactca gacggaagcg ccgtccggcg aactcctaca ggaggtgcag cgtctccaag
1381 aactgagagc ccgaattcag gaacgagcgg ccaagatcac aacgccgacg gccttccatc
1441 cgactgatac gtccaagatc tgtttcgacg tgtcgacaat ggactcgata gttcagctga
1501 cctcctacca ggagcgcgtt cgcgacctcg aggagagact cgaggagtac gaggaagccg
1561 agaggagctg ggaacaagag aagcggctgt cgaagcagcg ggaggaggaa ctgttggatg
1621 aaaattacaa acttacagag agaacgtact ggttggagaa cgaactgcgg actatcgtga
1681 aatgtaccct cgacgaggct gacagcggga acggagatga gacgagtgtc gtacaggaaa
1741 tgaaggacgt gggccaaaat gaacaccaag ttccagaaga tacacagaat tcgaaagatg
1801 tgcaagatca acttaaagat gcaaactgca cgcgcgctgt tcagaccatc gaaacgtatg
1861 gaaactacgt ggccacggaa tactcccgat gccaagataa aaacaactcc gaccagcaga
1921 gtttgattct gggtgctcaa tgtaatgtca cgcttgtatc cctggaggaa aaggaaaagg
1981 aaaaggaaa
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