LOCUS LJ652247 3349 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq4.
ACCESSION LJ652247
VERSION LJ652247.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3349)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3349
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1118 a 620 c 704 g 907 t
ORIGIN
1 ttaatctgct cgattgtttt tatttttaac atataagcaa aatgcgatta ttcgataaca
61 tgaaagaaat attgataatg agaaattaca gtttgatgca ttactataaa tttatactct
121 ctttctttca tgtatatttt cttctcactc tttgcaagat taattcttca ttagtacatt
181 tcacaatctt attacaaatt tgataatata gtttacaaag cataaagaca caagataaat
241 ttacaaattt gaaagtctct caggtttttg ataaagatgc aattagaagt atatttattg
301 attatgaaaa tccgaaaaaa ttgcttttaa tatcgagata ataataatta tcttataatc
361 aaaataagaa tttagaggca agttaaactt gaaaaatata aattgaagaa ttttcattta
421 taaaaaaatt catcatttta tctaatagat ttaacaaaat ctcatagctc tcttaactct
481 caatcgagat taattgatgg aataattgat acttaaaaat tcgctcgatt ttcaaatttt
541 cccttgaata tttacattca aagaagaatt atttatgcgc ctactacaag gctacactgt
601 aaaactcacc catcaatctc acggatgaac atttactcga gggttgagag acgcaatgat
661 ccaacgccgg gcgtttcgta atataaacat ttttcttatt caaacgtatg ttcttacatt
721 tacacagtac aaaaaattat actcagacct gccggcccgc ggttcataac tgctatgact
781 gggggcggcc ggtggttgat agaagggagc ttaggaaaag tagataggta ggtaagtagg
841 taaaggatgg aactttttcg gggatggata tatatctcgc ataggactcg aaggtctgta
901 cattgttata ctatccattc gactccgccc ccaatgcacg gccccatgtt ctctcaatct
961 gtcacatttt caccggatta ccacacacgc acatgcaatc tttttctctc ctctctctct
1021 ctctctttct ctctttccct cgcgatatca ccccggctga gacacccccg tgataaccat
1081 ctgcacgcgt gcacatacgt ccacgtacac acgctcgcgc acgcacacac acgcgcgcgc
1141 attcgtccac acgcattgac accaccccga gtcgctttaa acagccgcca acatgtctga
1201 cgacgaggaa caatactccg aggaggagga agtcgaggaa gtgaagggta gggcgtccca
1261 aaaggaatct ggcgagaatc ccgagtttat gaagaggcaa gaacagaaaa gaagcgacct
1321 tgacgaacag ctcaaagaat acatagcgga atggcgaaag cagagagcca aggaggaaga
1381 ggagttgaag agattaaagg agaagcaagc caagcgcaag gtcacccgcg cggacgagga
1441 gaagagattg gctcagaaga agaaggaaga ggaggaacgt cgccaacgtg aaatcgagga
1501 aaagaaacaa cgtgacatcg aagagaagag aaggcgcttg gaggaatcgg aaaagaagcg
1561 acaggctatg atgcaagcga tgaaagatca agcgaacaaa gccaagggtc caaactttac
1621 cattaccaag aaggatttgg cggtgggtag aatcgagtat atatattttt ttaaattatc
1681 tgcaacaact tgatgcaaat tctttgtacg cgcagggtaa tctttcatcg gcgcaacttg
1741 agcgtaacaa gacgaaggag cagctcgagg aagagaagaa aatctccctc agcattcgca
1801 tcaaaccgtt ggagatcgaa aatctgaaca ttgacaagct ccgtactaag gctaccgaat
1861 tgtgggaggc tatagtcaaa cttgaaaccg aaaagtacga tctggaggag cgacagaagc
1921 gtcaggatta cgatcttaaa gagctgaagg aacgtcagaa acaacaactg aggcacaaag
1981 ccttgaagaa gggtctcgat cccgaggctt taactggcaa atatcccccg aaaatccaag
2041 ttgcctcgaa gtatgaacgt cgcgtcgata ccaggtccta cgacgacaag aagaaacttt
2101 tcgaaggcgg tctgaacgaa cagcagaagg agatcatgga gaagcagtgg gccgaacaaa
2161 aacaacagtt catgggtcgt cagaagacga agttacctaa gtggttcggt gagcgaccgg
2221 gcaagaagcc tggcgatccc gagtcaccgg agggcgagga agacgtgaag gccgccgtcg
2281 acgacgacct cgaggagccc caattcgacg aggaagagga ggaggaggtg aaggaggaag
2341 gcgaggaaga ggaggaggaa gaggaggagg aagaggatat ctttgatggg atttttttcg
2401 gctcactccg caaacgcgcg tgtcgcttcg ttctgtagac tccgttctgt agactccgat
2461 gcaaatcaaa ctggagaaag atgaaactcc tctattttat ctgttgaggt tcctttgttc
2521 attgtattat caaacttagt cccgtagaaa gatatgtgaa taatcagtcg agttaataat
2581 gaacgcaaca atatgtctcg tttctttctc ttcctctctt cctttttttt cttccttttt
2641 tttccgggca agtgattatt tcaacagaaa cgagaaagta actgcgtgat caagtccctg
2701 gatatacgta tttctttttt taactgcttt cttttctcta acgtcacaaa agattctata
2761 cgcattaaga gcttatgtaa tcaatccagt tacgttgttc acctgattta tctgctttgc
2821 aatgtctttc tcgaataaca atgataatat aatgatagta gtagtactag taataataat
2881 aataatataa taataatata tggaagactg aattgtctaa atgtcaagta atatcgtcta
2941 aatattgtaa tttgagattt gtccgtttta aaattatttt atatgatata gaaaaattgt
3001 gtaaaattta atattaatat tgtcaccatt aaaagtaaat ttaaaaattt gtttagattt
3061 tggtaagaat ttaggaattt gttatatgta aatcattttc ttaattgttt atatgattaa
3121 tgaagatgat tccttacgga gtgccattaa gactaagcag tcaatgggca atcctctaat
3181 attattatat catcacgatt acttaagagg acctggatcg gaataactat tatagggtac
3241 aaaattctct gaattggcaa cagtattgaa aacttatgtg tttaaaatac aagaataagt
3301 gagacactca acttgagctt aaaaatagag agagaaagag agagagaaa
//