LOCUS LJ652245 2508 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c6_seq2.
ACCESSION LJ652245
VERSION LJ652245.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2508)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2508
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c6_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 790 a 515 c 564 g 639 t
ORIGIN
1 tctctctctc tttctctctc tcactcacgc acattctttc tgtctctttt ccttgctcgc
61 ttaagcatca ttaactcttt ctttctctct cttccgattt cttttttttt tttttgacca
121 tttacactcg cgcgctcgtg ctcgtactcc tttcggcata tctctcaatc tgtcacattt
181 tcaccggatt accacacacg cacatgcaat ctttttctct cctctctctc tctctctttc
241 tctctttccc tcgcgatatc accccggctg agacaccccc gtgataacca tctgcacgcg
301 tgcacatacg tccacgtaca cacgctcgcg cacgcacaca cacgcgcgcg cattcgtcca
361 cacgcattga caccaccccg agtcgcttta aacagccgcc aacatgtctg acgacgagga
421 acaatactcc gaggaggagg aagtcgagga agtgaagcag ccggagaaga agaccgaggg
481 tagggcgtcc caaaaggaat ctggcgagaa tcccgagttt atgaagaggc aagaacagaa
541 aagaagcgac cttgacgaac agctcaaaga atacatagcg gaatggcgaa agcagagagc
601 caaggaggaa gaggagttga agagattaaa ggagaagcaa gccaagcgca aggtcacccg
661 cgcggacgag gagaagagat tggctcagaa gaagaaggaa gaggaggaac gtcgccaacg
721 tgaaatcgag gaaaagaaac aacgtgacat cgaagagaag agaaggcgct tggaggaatc
781 ggaaaagaag cgacaggcta tgatgcaagc gatgaaagac cagagcaaag cgaagggtcc
841 aaactttacc atcaccaaga aagatgctct tgcgggtaat cttacatcgg cgcaactcga
901 gcgtaataag acgaaagagc agctcgaaga ggagaagaag atctccctta gcattcgcat
961 caagcctttg gaaatcgaag gtctgtccat tgacaagctc cgtactaagg ctaccgaatt
1021 gtgggaggcc atagttaaac ttgaaaccga aaagtacgat ttggaagagc gacaaaagcg
1081 tcaagattac gatcttaaag agctgaagga acgtcagaaa caacaactga ggcacaaagc
1141 cttgaagaag ggtctcgatc ccgaggcttt aactggcaaa tatcccccga aaatccaagt
1201 tgcctcgaag tatgaacgtc gcgtcgatac caggtcctac gacgacaaga agaaactttt
1261 cgaaggcggt ctgaacgaac agcagaagga gatcatggag aagcagtggg ccgaacaaaa
1321 acaacagttc atgggtcgtc agaagacgaa gttacctaag tggttcggtg agcgaccggg
1381 caagaagcct ggcgatcccg agtcaccgga gggcgaggaa gacgtgaagg ccgccgtcga
1441 cgacgacctc gaggagcccc aattcgacga ggaagaggag gaggaggtga aggaggaagg
1501 cgaggaagag gaggaggaag aggaggagga agaggatatc tttgatggga tttttttcgg
1561 ctcactccgc aaacgcgcgt gtcgcttcgt tctgtagact ccgttctgta gactccgatg
1621 caaatcaaac tggagaaaga tgaaactcct ctattttatc tgttgaggtt cctttgttca
1681 ttgtattatc aaacttagtc ccgtagaaag atatgtgaat aatcagtcga gttaataatg
1741 aacgcaacaa tatgtctcgt ttctttctct tcctctcttc cttttttttc ttcctttttt
1801 ttccgggcaa gtgattattt caacagaaac gagaaagtaa ctgcgtgatc aagtccctgg
1861 atatacgtat ttcttttttt aactgctttc ttttctctaa cgtcacaaaa gattctatac
1921 gcattaagag cttatgtaat caatccagtt acgttgttca cctgatttat ctgctttgca
1981 atgtctttct cgaataacaa tgataatata atgatagtag tagtactagt aataataata
2041 ataatataat aataatatat ggaagactga attgtctaaa tgtcaagtaa tatcgtctaa
2101 atattgtaat ttgagatttg tccgttttaa aattatttta tatgatatag aaaaattgtg
2161 taaaatttaa tattaatatt gtcaccatta aaagtaaatt taaaaatttg tttagatttt
2221 ggtaagaatt taggaatttg ttatatgtaa atcattttct taattgttta tatgattaat
2281 gaagatgatt ccttacggag tgccattaag actaagcagt caatgggcaa tcctctaata
2341 ttattatatc atcacgatta cttaagagga cctggatcgg aataactatt atagggtaca
2401 aaattctctg aattggcaac agtattgaaa acttatgtgt ttaaaataca agaataagtg
2461 agacactcaa cttgagctta aaaatagaga gagaaagaga gagagaaa
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