LOCUS LJ652243 1179 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c5_seq1.
ACCESSION LJ652243
VERSION LJ652243.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1179)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1179
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c5_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 404 a 175 c 166 g 434 t
ORIGIN
1 ccagcgctta gtagtagtga tttcaagtag cgaagcccgt gcaagatcga atttttttgt
61 ttcgtttaac gaataagatt aggggcgagc tttgtctcca ggctttcttg atcagtcgtt
121 acaaatgtgc tgaattatag tatcaaaaac aaaaaaaatt atacgaattt acttttcatt
181 aacatattct ttcgaaataa atatgggacg aatgcctatt cctatatttt tctataaaat
241 attttagttg taggataagt ccttttttta atttgtgaaa catgtagagc aaataaaaaa
301 aataatttaa aaggtttatt ttttcaattt attttattca tattactaat taaatttatt
361 tataaataaa ataaattatt aacaaattta ggataaatca taaaaagaaa ttgtactgca
421 aatttctcat ttatcttgat attcgcaaaa atgaaatcac gatctcgatt tctcatttct
481 gatatcctag tacatgcaat tgcaatgact aatctgtata gcctccccga ttaattttcc
541 tagatcactt tttaactttt gtgttctctt tgctatatat cttatttcag tcagtttgct
601 caccatacgt tataaagcgt cacgatcgaa agattacaga aaaaaaagaa taagcgaagc
661 cgcgataact gatatgataa ctcaaatttc tacgaggaaa aaaatccgag ttcgatttgt
721 gtagaaaatc tttaacgaaa cgattaccct tttctagttc attacacaca cacatatata
781 cacatgttat attgtataga atcggatgta aattaaacta taggtaaaac gaggattcga
841 gaatttttag accgatatat attattagct cagtctttaa acgtaatttc atagagagat
901 gtgttaataa tcagtactta ttgagttttt aggacgcggt atgcgatctt gtctttttct
961 cttctatatt tcttgcaaac aaactgctat ttcaatagca agggaacaat tacttgaaat
1021 acacatttct tttctctaat ttttttaatg tgttcgttaa tctgagattc aatatacgcg
1081 tgcagtaaga gtttataatt gatgatataa ttacatcgtt tgtgtctaat ttatccgctt
1141 cgcaacgtct ttctcgaata ataataataa taataataa
//