LOCUS LJ652241 4503 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68305.graph_c4_seq1.
ACCESSION LJ652241
VERSION LJ652241.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 4503)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4503
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68305.graph_c4_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1463 a 769 c 716 g 1555 t
ORIGIN
1 tctctatgtg gtctcgttag agcaccgcgt agttgcgtat ctcaaggaaa ttgactttcc
61 acgatctacg aaggcaaaat ctaacttcca tttcgtgcaa acgacgaaat gtttctttaa
121 tccttgttat tgatctccct cgaaattgtt ttaataacta cgaaattaac tctgttcggt
181 tccgtcattg atactccatc gccagatcga tatgacgaac ctttatcgtg acgataatga
241 atcgctcatt tattattgaa aattaatcat ataaaggaat gcgttgtgag gcaaaacatt
301 agtaaaatac atattatctc agaacatttt ctttatgtct caatttaagt ttatcgctga
361 cgatttcaaa aaaagcgccc ttaatctctt tttttccctt ctctctctct ttctctaaat
421 tctgtcattg tgaaagttcg agctcccccg aaccgtagta ggaaaatgcg attcagtaac
481 gagacttaat ctccgagtgc tgcaaactac tactactacg actactacta ctactaccga
541 atcggaaacg aacaaactgc agacggctca agatggcata acatcctcgt caccatcttt
601 caacaattct aatttgacac ctaacatcgg cttcgcggta tcgtcgccga atataggttt
661 caatttgtcg ccagcatctt cggccactaa cacctttagt actagcaatg gtttcactgg
721 cacggggccg agttttaaca atttttctac tcaaaataat ggtaacgccg ctgcgacaag
781 tcccctgagc gatttagatg aatttgatgt gattactaac agaggaaaac tcggagctag
841 tccgcagaca gtgaacaacg gtggtacagc atcatcagga ggagatccct ttgatctagg
901 tggtatggct gaaacccttc ctgccagtac aggcgctgtg aaaaagacac cacaatcctt
961 tttaggagaa aattctgcgc tcgtcaattt ggataatctt gtcagtgctt cggcgattaa
1021 accatcggct cctgcgccag cggcaaccat gtcatattca gcaaatccat ttgcaactgt
1081 gacgccacca ccccgtccta caatcaatca gattcgacag gatccatgga cagcgaatac
1141 aactactacg gctaatccgt tcctctcgta gcctgatcga tcaatcgaaa acttcgtaat
1201 tactgcgaaa cgtgatccgc agttctacat atactattac ggtataaatc ggttcacggt
1261 aaaaaaaata tgattttact tatagcaatt atgtgggtag ggacagaagt gaataagatc
1321 aataagaggg cggagaaaac atccccatca atgaaatttt attgatagct taaagcatta
1381 ctttttgatg aattatattg cagcgcactt atgcttattg tacaagtctc ttttttcttt
1441 ttttttagtt ttctttgcat gtactactcg cttcttaaag tttattgtgg aataatcacc
1501 taaataatta actagtggaa gtgtggcata tttgtaatta agtgatggtt ggatggttaa
1561 aggtacaaca taataataca aatcatgttt taactttgaa cgcttaaatg atcccaaggt
1621 acgattagat tttatataca ctcctttctc tatatgatct attttctatg tatgaatcaa
1681 ttcagggaaa gattgctcag caatataccg cttcactgct ggggaagaat gtaaagtaac
1741 cgctggcatt gaaatcagtt tatgcgtttt tgtatacaca ttttctatag taaaaaaaaa
1801 ggggaaaaat gagatcgtga gactgtaatc gtgatttgca gaaacattgt tataatgaac
1861 agagttccgt tcgctgttat acgcttaaga tgtgtcgatt atggtctgta aaaaaaaatt
1921 caatgttgtg gcttgctttc taatacagaa tccgtaataa gggcagctat tgtgttgcaa
1981 agtgtacacg aatttcttac atagctgtat agccggtcat tcacgaatga catactgcga
2041 cctatggcac actaaggcac ttctaaacga aaaaaatgca actgtgaaag tagcatccac
2101 gctaaatgat acgaacatta agaaaataat ccatattgtt tttactactc aaagtctcga
2161 tttcaatcga ccgtgtgcac atttatatac agatctggca tagctgaaga atcaaattca
2221 agagcgataa gaactgtgtc tatcgtattc gagttattga tatttaatta aatcgaaata
2281 acaatgtgtt atttctaatc cattttcaat ttaacatttg cgtcaacgtc caaagttgcg
2341 taagagcccg atcgctcata ggataaattt ataacaagtc tacaaggaag gttttttcct
2401 atccatattt tataaatttg catgataaaa acacgaatca gatttcttta acatacgaaa
2461 caaatacgta catattttaa tttatataaa aaatgtacat atattaaagc atatcgttcc
2521 ctcgtttgtc aaatgtttgt agtgcatata caaaatacta atgcagaaac tttttactgg
2581 ttaattaaaa gctatactcg tcattatcgt gttctgtatt tgtagaaaaa tttactgagt
2641 tttttataaa tctttttatt agatttacta ttcttgcttg tatcactgta ctctgatatt
2701 aaatgatatt atttatttta caatatatat ccgtttataa attgttctgg tatagacaag
2761 caaaaatttt ttaatatcct tgaaatgttg catgatttca gtatcttttt tttttcaaat
2821 aaaataattt taccgcactt tacagtttta cacaaaaaaa atatttatca gtatacagca
2881 ttgacaaagg ggaactatat tagcttggct cttatctgaa taaatcagga gttgcacgat
2941 ttaagctatt ctattcaagt aaacgtcgag caaataattc caatgtatta tttatcatta
3001 aatctataat ttttgttgac tttatgcaat tttaacatac ttgcttatat gagtgaaatt
3061 gtatatttaa tatgtattta tccagatgtt cgccaggaca tgaagttaaa atgtatgata
3121 cgtataacgt gtagagattt aattatacaa tcattgtctt taacgattta aaaatataaa
3181 caattctact agccattgta cctgttgaat ataggatgac atattacagc atcctgtata
3241 ctttggtttt gtttatgtag atctgcatct tttttacctg ttttatttaa gcaactaata
3301 tataaatcat gatgtacaca gcttcatccc tgtgcgaaca gtggaatatt tttgtttagc
3361 ttttagagct gatgtaattg caggaaaaag aattcaaaga acatttatat aaataaatat
3421 tatatatttt agtagattat aatgatatac ttattaataa ttatacaaat aaatataaaa
3481 atttttaagt tttctcaaat ttaacattta aaattccttt ggtacttttt tctagagaat
3541 ttgtgcgtgt atatatatgt atttgattat actaattgaa atctatacat ttaataatta
3601 ttatataaaa agataaaaag aaagtcatga tattttcatt aatacttcaa taaaaaagat
3661 attgtttatc actatacaaa tatttccatt aaaatattat aagtaaattt tagataagtg
3721 atttagatat ttaaattaaa aaagtaaaca aaaataatat aaatctatta tttatttcat
3781 aaaaatgcat gagaatattt ttttttattt gcgcacaagt tatccttatt taaattaata
3841 cagtctttag ataaaaatca tatatgaata aaattaccag atgtaagttt tattagagtt
3901 cgtatgtgaa tctgtttcaa tttaaagaga tgcttcagtt gaagagttta ttgtaattgg
3961 tggaagaaag tacgaacgga tctgactatg tagctgtgct atttcagcat cctctctctc
4021 taaagctcta atgagctgtg caaattgtac agtaccttct cttccttctg gaaatccata
4081 attttttata acgtccattt gaatctgtgt tactagtggg aacacgaatt gcatcatttt
4141 caacatctcg ttgccggaac tctccttcgc ctctgcaagt ttttgtaagt tgtcggatgt
4201 attcaatgct gccagaattt ctgtcaatat agcttttgca gtttccaatg taaaaccagg
4261 aacacttgcc attatgtatt cttttcctga aatttgttca cgattttatt cagtcataac
4321 tgatgattat ttctttcaca atactactca tcacagaact gtaatatttt ggtttgttta
4381 cgtttatcaa taaatgtaaa taacaactat ctgcagcact tacagaagtt gcatttgaca
4441 tcaatttctg gagcattaga tggcaagtgc taagcgcgcc atcttgctcg agaggagtag
4501 ccc
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