LOCUS LJ652055 3400 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69084.graph_c3_seq6.
ACCESSION LJ652055
VERSION LJ652055.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3400)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3400
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69084.graph_c3_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1122 a 599 c 595 g 1084 t
ORIGIN
1 tttctttttt ttcttttttt taaattaagt aatctttttt ttttgtagaa aatatttact
61 agaaaatatg tttcttttta aggtacaatt tcatggtgtc gcttgtcgcc gagataagta
121 gtcacgtgac caaattatgt ccagttcttg tcgctagcga tgccgaagaa aagtaggatt
181 gaatccaact tctagcgacg tcgcttcacg tgattatcaa gtaaatttga atatggatct
241 gcaagatata gctgttgtac atacctgcgg gatatgtgaa acaattattg atcaaaacga
301 cattccgatg catgattgta taagagcata caaaaagttc ttcgtggata ataattatta
361 tttttatcca gtaacaggtg ataatcgcat tgttcgacga agccttgtca ataacaaaga
421 agtcgtcttg ccggttcgtg aaaagattag tggaactata acaacacttt cgtcaaacga
481 attacaagct gaaaaggaaa ataggtctca taatgagaga gacaaaatcg caaagtctac
541 attaaattac gatgacgagg aacttttaat tttattagtt caagaacgaa ggcccctgtg
601 ggattttact attccattag aacagcgatg tcaacgcata acaaaaaaac tctgggatga
661 agtgtcagaa acattgagag gtaaacttag tggtgaagaa gcaaaaaaaa atttaaaaat
721 ttacatgacg cctatagacg aataataaat actgaaaaac gccctagtgg gtcggctaga
781 cctctcccta caaagaaatg gcaccactat gaatccatgg agtttttgcg tgacttatgt
841 cttgtcaaaa agggaaaagt ttctaatatt gacgctattg atgtcgatga ctctgcgagt
901 aacattggcg aatcaataaa tgatgatgca acttgtgatg gcccatcaga ggcatcaggt
961 acaacaacta aaaagaagaa gacctcggga cagcagtccg atgcattaga tagaattgcc
1021 gattcactct gtcgaccatc aactccactt gtattaccac cagcacccaa atgtgatgaa
1081 attgattcgt cattagcagt aatcggatgg aggttaagac aaatgaatcc aacacaacaa
1141 ttacatgtca ttcagcaaat gatgaaccta acttttgatg tactcacaaa aaattaagtt
1201 ttattatttt tttaaaagca tacatctgtt acatttttat aataaagttt aaatcaactc
1261 cactgatatt ttataattta ttatacattt tcagacaagt taaattgcat atatacaatt
1321 aatgaatgag tataagaact aacaatgata gaattgactt ggtatggcac cttcactatt
1381 aaaatattta cagaattctt cgcgaatttg catcgcttga cgagaactat tattagaacc
1441 gcactgagtt atgttttcta atgcactatt atccgtgcaa tttctccaag aacctggaat
1501 aaagccgtca tcactctctc gatcaattag tgttgaagta acatattgat tttcttcaat
1561 atccatctga cgaatccaat tatggaggca tataatggct ttaacaattg aaattgtctt
1621 ttctatacta caattgattg gtcgcttcaa aattctccat tgactgacta aaataccaaa
1681 tgtattttcg attgttctcc tagctcgact caatcgatag ttataaatat ttcgctcgtc
1741 gtttaaaccg ccttttcctg gataaggccg gagtaaataa tctgacaatt gaaaggcttc
1801 atcgcccact agaacatatg gtaaaggagg tccacctggg ctgagaggtt ctggtgcagg
1861 tacgttcatt tcctttgatg caaattttag acccatcgtt gaatctctaa aaataccacc
1921 gtcactgcga cgaccgtagg ctcctatatc aacgaacgtg aacatatatt gtgcgtcaca
1981 aattccgagg agcacaatac tgtgagtctt cttataatta taataagatg agcctgcttt
2041 aggtggacat tcaataataa catgtttgcc gtcaattgcg cctacgcaat gattgaaatc
2101 ccatttctct tcaaattctt tagcaaggtg tagccattcc tctgttgttt ttgatggtgg
2161 gatcactttc tgacgaatac agttccatat agcatcgcat gtttcaccta taacgtggct
2221 tattgttgaa actccagcga gaaagtgata tgacattgaa tgcatcgaat caccagttgc
2281 taaatatctc aatgttatag atagtcgctc tgcaggaggt aacggttctc taattaccgt
2341 ttgtttagtg attgcaggtg ccactaagtg taacaattct tcaaattgca taactgtcat
2401 gcgataatag tttcgaaaat tttctggagt taatcttgga acagatgcgt agtaaaaacc
2461 atgttcacgt cgtcttttaa ataatggatc aatccaaaat ctcttttttt atattttttt
2521 ttaactttgc aatgtataca gcgactatta gtttatttcg tcgacgttgc tcttcatttt
2581 tattataaat aattgtagca acttgacagg cccactcgtg atatctttct tgatatgaca
2641 tgttggacac acacaatgta gaaatttact tttttgtgtg ttcttacttg gaacacgcgt
2701 agtaaaatat tggcattgaa actccttcgt agtctgatat tcagggcccc tcaagaagaa
2761 aaagaaggga tacgcgtcgt caacctgccc gaggagcttt gaggttattt aacgattgaa
2821 atttatttta cacaacacct aggttatgtt ttttttcttt ctgtcgctgc tttccgttca
2881 cacaagcgac ggttgaaatc agcgacatat aatatcacga gacttgtctg tcgctgaata
2941 tgagcaacaa gcgacaccat gaacacatac ctttatacac acggcgggac cgcatagcgg
3001 ctgtgtacgc gttcgcttgt ttcgtcgtat gttgtgacgg tcggtgaccg agccgcaaca
3061 ttatatacat acatataatt aatgaacatt gtaaaatacc taattataat ggaatatata
3121 taatcatact ttttaataga attaaaaaag aaaagttaag tctaaagaaa aatttgttgg
3181 aaatttaata ttttaattaa cttgaaaaac cttttactgt ggtgtataat agtctaatca
3241 atattaatga ataaactatt tcacaaaata atgtaccgag cagtaaatat taaacgacgt
3301 aaaaatgtat atttttttca aaaacttcta aatatacctt aaaatattta ttgctaagtg
3361 aataataaat gtgtattgac aaaaaaaaaa aaaaaaaaaa
//