LOCUS LJ652051 3605 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69084.graph_c3_seq2.
ACCESSION LJ652051
VERSION LJ652051.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3605)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3605
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69084.graph_c3_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1151 a 664 c 645 g 1145 t
ORIGIN
1 tttctttttt ttcttttttt taaattaagt aatctttttt ttttgtagaa aatatttact
61 agaaaatatg tttcttttta aggtacaatt tcatggtgtc gcttgtcgcc gagataagta
121 gtcacgtgac caaattatgt ccagttcttg tcgctagcga tgccgaagaa aagtaggatt
181 gaatccaact tctagcgacg tcgcttcacg tgattatcaa gtaaatttga atatggatct
241 gcaagatata gctgttgtac atacctgcgg gatatgtgaa acaattattg atcaaaacga
301 cattccgatg catgattgta taagagcata caaaaagttc ttcgtggata ataattatta
361 tttttatcca gtaacaggta taatatatac aatataataa aagagacgag agttacaacg
421 ttattgttga tgcgtaccag tacttttgtg tttattgatc agtttccatc aaattggtac
481 gaacgtttta acccgagttt gaatcgacaa ttaaaaacta atcaagcctt tgttcacata
541 acatggtgtg actcgcatta gccctctttt attaaattat taaatctcat gagtcttcca
601 aatatcttta aaaaaaatat atatacttaa tttttatttt atcattgaaa aaaataacat
661 tctacaagaa tgtatattat tatttgtagg tgataatcgc attgttcgac gaagccttgt
721 caataacaaa gaagtcgtct tgccggttcg tgaaaagatt agtggaacta taacaacact
781 ttcgtcaaac gaattacaag ctgaaaagga aaataggtct cataatgaga gagacaaaat
841 cgcaaagtct acattaaatt acgatgacga ggaactttta attttattag ttcaagaacg
901 aaggcccctg tgggatttta ctattccatt agaacagcga tgtcaacgca taacaaaaaa
961 actctgggat gaagtgtcag aaacattgag aggtaaactt agtggtgaag aagcaaaaaa
1021 aaatttaaaa atttacatga cgcctataga cgaataataa atactgaaaa acgccctagt
1081 gggtcggcta gacctctccc tacaaagaaa tggcaccact atgaatccat ggagtttttg
1141 cgtgacttat gtcttgtcaa aaagggaaaa gtttctaata ttgacgctat tgatgtcgat
1201 gactctgcga gtaacattgg cgaatcaata aatgatgatg caacttgtga tggcccatca
1261 gaggcatcag gtacaacaac taaaaagaag aagacctcgg gacagcagtc cgatgcatta
1321 gatagaattg ccgattcact ctgtcgacca tcaactccac ttgtattacc accagcaccc
1381 aaatgtgatg aaattgattc gtcattagca gtaatcggat ggaggttaag acaaatgaat
1441 ccaacacaac aattacatgt cattcagcaa atgatgaacc taacttttga tgtactcaca
1501 aaaaattaag ttttattatt tttttaaaag catacatctg ttacattttt ataataaagt
1561 ttaaatcaac tccactgata ttttataatt tattatacat tttcagacaa gttaaattgc
1621 atatatacaa ttaatgaatg agtataagaa ctaacaatga tagaattgac ttggtatggc
1681 accttcacta ttaaaatatt tacagaattc ttcgcgaatt tgcatcgctt gacgagaact
1741 attattagaa ccgcactgag ttatgttttc taatgcacta ttatccgtgc aatttctcca
1801 agaacctgga ataaagccgt catcactctc tcgatcaatt agtgttgaag taacatattg
1861 attttcttca atatccatct gacgaatcca attatggagg catataatgg ctttaacaat
1921 tgaaattgtc ttttctatac tacaattgat tggtcgcttc aaaattctcc attgactgac
1981 taaaatacca aatgtatttt cgattgttct cctagctcga ctcaatcgat agttataaat
2041 atttcgctcg tcgtttaaac cgccttttcc tggataaggc cggagtaaat aatctgacaa
2101 ttgaaaggct tcatcgccca ctagaacata tggtaaagga ggtccacctg ggctgagagg
2161 ttctggtgca ggtacgttca tttcctttga tgcaaatttt agacccatcg ttgaatctct
2221 aaaaatacca ccgtcactgc gacgaccgta ggctcctata tcaacgaacg tgaacatata
2281 ttgtgcgtca caaattccga ggagcacaat actgtgagtc ttcttataat tataataaga
2341 tgagcctgct ttaggtggac attcaataat aacatgtttg ccgtcaattg cgcctacgca
2401 atgattgaaa tcccatttct cttcaaattc tttagcaagg tgtagccatt cctctgttgt
2461 ttttgatggt gggatcactt tctgacgaat acagttccat atagcatcgc atgtttcacc
2521 tataacgtgg cttattgttg aaactccagc gagaaagtga tatgacattg aatgcatcga
2581 atcaccagtt gctaaatatc tcaatgttat agatagtcgc tctgcaggag gtaacggttc
2641 tctaattacc gtttgtttag tgattgcagg tgccactaag tgtaacaatt cttcaaattg
2701 cataactgtc atgcgataat agtttcgaaa attttctgga gttaatcttg gaacagatgc
2761 gtagtaaaaa ccatgttcac gtcgtctttt aaataatgga tcaatccaaa atctcttttt
2821 ttatattttt ttttaacttt gcaatgtata cagcaactat tagtttattt cgccgacgtt
2881 gctcttcatt tttattataa ataattgtag caacttgaca ggcccactcg tgatatcttt
2941 cttgatatga catgttggac acacacaatg tagaaattta cttttttgtg tgttcttact
3001 tggaacacgc gtagtaaaat attggcattg aaactccttc gtagtctgat attcagggcc
3061 cctcaagaag aaaaagaagg gatacgcgtc gtcaacctgc ccgaggagct ttgaggttat
3121 ttaacgattg aaatttattt tacacaacac ctaggttatg ttttttttct ttctgtcgct
3181 gctttccgtt cacacaagcg acggttgaaa tcagtgatat ataaaatcac gtgactcgtc
3241 tgtcgctgaa tatgagcaac aagcgacacc atgaacacat accttaatac ctcaactcag
3301 agtgaggatc agcatctatc ggacatgtca acaggacaag ccgtgagact gcttacatct
3361 cagattcctt ctttcagtgg aacagaggag gaagatgttg aactttggat tcgaaaagtg
3421 gaattcatcg ccgatactca tggtgtgtcg gataaagtca taagattggc tgcatcccag
3481 aaacttgcca atgatgccaa ggattggcac gacatgaata tcggaccagc taccagctct
3541 tgggcttcgc tgaaacccgc tttaatcaag gcattccgtc gtaaaatacc tattcacttt
3601 gctat
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