LOCUS LJ650720 1642 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68830.graph_c4_seq25.
ACCESSION LJ650720
VERSION LJ650720.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1642)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1642
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68830.graph_c4_seq25"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 492 a 324 c 327 g 499 t
ORIGIN
1 ctattccttt atttttgtag gcatatttct gttgccgaac gcaacattgt cgattatgat
61 gccgtgggca cattttctgt taccgatcat gttacgtaca gcggagcaca gcgtgatttc
121 cgagactgtg attggttccg cgggatcgca tgatcggcct tgatttgtta ttgtcgttgt
181 gcccttatgc gcgttttgag agagctccaa ttttgacgcg cggttcggca gttctgccgg
241 agcagcctgc gagcactgta cataatacaa ggatactttg ctgacgacct ggctctcgtt
301 aatttgccta ccgactatcc atccttaata aaagccccta cattacagat tcgaggtgct
361 tgcggaatta attgcggctt ttatcgttat cttgagtagt gtgtacattt attataaata
421 tgtaatattt aatttctggc gtaagagagg tgtcttttat atcgaacccg ttgttccaat
481 tggaaatata gcacctcttg taattgggaa atctcaaata ggtgtatttt tccatgatat
541 atatttaaaa tataaggatc atccggtttt tggaacgtat tcacttttta aaccaaattt
601 ggtagtcgcc gatcttgatc ttattcgaac gctgttgata aaagaattta agtcttttca
661 tgatcgtgga gcgtattgta acgaaaaggt tgatcccttg actgaccatt tgttcctcac
721 atctggaaaa aaatggcgaa atatgcgcgc caagatgaca ccaacgttta cttcgggaaa
781 aatgaagcag atgtttgtta ttctgaaaga gtgtggtgaa gaacttgcaa agtatctaga
841 tagtaaagct caaacgagag attccattga aataaaagat acatttggaa gatatacaac
901 agacgttatc atgtcagccg cttttggtat caaatctaat tgtattgagg aacccaataa
961 tgagtaccgc gttcaaggaa aaaaaatttt tgatttaaat tctattaagc tcgcactggc
1021 tatgtttgca ccgcaagtaa tggacttcct ttctattccc atcacggcac agtctgtcac
1081 tgacttttat atgaaaatgt ttcgagagac tgtggaatat aggcaaacta atcatatcgt
1141 cagacctgac tttgtgaact tgctcataca actcatggag aggggctacg ttgatcctga
1201 agatgacaaa aatacgtcca acgaatcatc aactgtaaat aaacttacca tggtagaagc
1261 tactgcgcaa agttttgtct tcttcgcagc tggtttcgaa acttcctcat ccgcggcaac
1321 attcgtttta tacgaattag cacaacatca agatgtacaa gagaaagttc acaatgaaat
1381 cgatgaaata ttgaaaaagc atgataatct aacctacgat gctataaccg acatgacata
1441 ccttcacaaa gtaataaatg aagctttaag attatatcca cctctcccaa ttttgaatcg
1501 aatctgcact caggaaatag acttgccgac tgtaaacatt cgagttccaa aaggaacgtt
1561 aataacaata ccgatgcttg ggctgcatcg agatccgtcg atatacccaa acccggagaa
1621 atttgatcct gagcgcttca ac
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