LOCUS LJ650717 1510 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68830.graph_c4_seq22.
ACCESSION LJ650717
VERSION LJ650717.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1510)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1510
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68830.graph_c4_seq22"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 495 a 255 c 292 g 468 t
ORIGIN
1 atttctcata gtatatgttc tgtgcctctg cgtgatccag aactcccaca gagatttttg
61 ctgattcatt ttcattagaa ggatggccgt atcgttccca gttcgttggc gtggaaacgg
121 gtgctattaa tcataagaag aagagtgaat acatcgtgat gaataagacg tatttaaaaa
181 acgctgaacc actttaagaa ataatcagca atatcaatta ttcgagatgg tgcttgcgga
241 attaattgcg ggttttattg ttatcttgag tagtgtgtac atttattata aatatgtaat
301 atttaatttc tggcgtaaga gaggtgtctt ttatatcgaa cccgttgttc caattggaaa
361 tatagcacct cttgtaattg ggaaatctca aataggtgta tttttccatg atatatattt
421 aaaatataag gatcatccgg tttttggaac gtattcactt tttaaaccaa atttggtagt
481 cgccgatctt gatcttattc gaacgctgtt gataaaagaa tttaagtctt ttcatgatcg
541 tggagcgtat tgtaacgaaa aggttgatcc attaaccggc aatttatttc ttatgcctgg
601 aaaaagatgg cgaaatatgc gcttcaagtt gacaccaaca tttacttcaa gaaaaataaa
661 gcagatgttt tttatcctga aggagtgcag cgaagaactc gtaaagcatc tggagagtaa
721 agctcaagta agagagtccg tcgaaataaa agatataatt ggaagattca tgacagacgt
781 aattatgtca acggcgttcg gtgtcaaatc taactgtatt gaggaaccaa ataatgagta
841 tcgagttcaa ggaaaaaaaa tttttaattt aagttctatt aagatagcta tgactttttg
901 tgtaccgcaa attatggact tcttttctat tcccttattg ccacgatctg ttaccaactt
961 ttatatgaat atgtttcgag aaaatgtaga aaataggaaa gctaatcaca tcgtcagaca
1021 tgacttcatg aatttgctta ttcaacttat ggaaagaggt tttgttgatc ccgaagataa
1081 caaaacgatt attaacgaat catcagccat aaacaaactt accatgacag aagctactgc
1141 gcaaagtttt gcgttcttcg gagctggctt cgaaacttcc tcgtcgacag taacatttgc
1201 attatacgaa ttatctcagt accaagatat acaagataaa actcgtaacg aaattgatga
1261 agttttagca aagcatggtg aattgaccta tgatgctgta aacgacatga catatcttca
1321 aaaagtgata agtgaaactt tgaggaaata tccacctatt cctatcttga atcgagtttg
1381 cactgaagaa atagagctac cgaacattcg cataccgaag gggacattaa taactatacc
1441 gctgcttggg ctgcatcgag atccgtcgat atacccaaac ccggagaaat ttgatcctga
1501 gcgcttcaac
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