LOCUS LJ650710 1046 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68830.graph_c4_seq15.
ACCESSION LJ650710
VERSION LJ650710.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1046)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1046
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68830.graph_c4_seq15"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 369 a 154 c 113 g 410 t
ORIGIN
1 gcaatctctc tgtgctatat gggtagtatc tgactattaa tatttgaaat aaattcatat
61 ctttctaaaa atataaattt aatttaacaa tacgttaatc taaagagtat aaaaataaag
121 acaatatact aatccatata ttttaatagt caaactttta aaatttttta aatgtactct
181 ttttagattt ttctcacttt actgaatcgc acacagtcta aattatatta taaaaatttc
241 tgatttttaa ttattttatt ttaagaattt gtaaatatac attatttaat taccaattaa
301 ttaatgaaaa atttattttt atttctcaat atataatttc tcaatttctg attgtggaca
361 gtatgaggca aaaaatacaa tgtatttttt aataacattt acttgatatt tctaatcttt
421 ctctgctgtc attggtgatt ctgttctacc tattactcta tctattactt tcatctacta
481 cttatattta taaatgcgta tttatctcta atatgccaat acttttttaa acttaaaaat
541 ttaaaaactt attccagtgt aaatgttttt aactttgttt aatattagta cttcgcaaac
601 tcgacatttg aaaaaatgta ttaataatta aatgtcaatt ttgccattca acagatattc
661 aacagatgta attacgtcaa cggcttttgg tatcaaatca aactgcatta aggaaccaaa
721 taatgagtat cgtatccaag aaaaaaatct tatcaatata aattctataa agatcgcctt
781 gactatgttt gcgccacaaa tcatggactt cttttctatt cccttctttt cgcaatctgt
841 cgctgacttt tatataaaaa tgtttcgaga gattgtggaa tataggcaag ctaaacatat
901 cgtcaaaact gactttgtga acttgctcat acaactcatg gagaggggct acgttgatcc
961 tgaagatgac aaaaatacgt ccaacgtttc atgttaatat acacagataa cgtttattat
1021 tatatttata atatatcatg ttacac
//