LOCUS LJ650706 1658 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68830.graph_c4_seq11.
ACCESSION LJ650706
VERSION LJ650706.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1658)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1658
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68830.graph_c4_seq11"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 550 a 281 c 304 g 523 t
ORIGIN
1 agtcacgcat gtgctgcatc gtcacaacga taccgatctc gtactttgtt ctcaagataa
61 agctttaacc acagtcaata attgattaag aatcggctga agtctcaaca gtaataagca
121 tctcgttctc tttgtacggt gtcggtgcgt ctgtttatga cgatagtcaa atatttgatc
181 gtctataacg aatttaaaac aatcttatac gaatagtgaa ttgtgaacca taagttacga
241 ctcaagtgta caaattgtct gtgatgttat aaactacaaa aaattaaaaa ataatattct
301 tactttatct tgcttaatat atctaatatt aacgtttgaa acaaaaattt gtgtcgctac
361 atttcagatt cgagatggtg cttgcggaat taattgcggc ttttatcgtt atcttgagta
421 gtgtgtacat ttattataaa tatgtaatat ttaatttctg gcgtaagaga ggtgtctttt
481 atatcgaacc cgttgttcca attggaaata tagcacctct tgtaattggg aaatctcaaa
541 taggtgtatt tttccatgat atatatttaa aatataagga tcatccggtt tttggaacgt
601 attcactttt taaaccaaat ttggtagtcg ccgatcttga tcttattcga acgctgttga
661 taaaagaatt taagtctttt catgatcgtg gagcgtattg taacgaaaag gttgatccat
721 taaccggcaa tttatttctt atgcctggaa aaagatggcg aaatatgcgc ttcaagttga
781 caccaacatt tacttcaaga aaaataaagc agatgttttt tatcctgaag gagtgcagcg
841 aagaactcgt aaagcatctg gagagtaaag ctcaagtaag agagtccgtc gaaataaaag
901 atataattgg aagattcatg acagacgtaa ttatgtcaac ggcgttcggt gtcaaatcta
961 actgtattga ggaaccaaat aatgagtatc gagttcaagg aaaaaaaatt tttaatttaa
1021 gttctattaa gatagctatg actttttgtg taccgcaaat tatggacttc ttttctattc
1081 ccttattgcc acgatctgtt accaactttt atatgaatat gtttcgagaa aatgtagaaa
1141 ataggaaagc taatcacatc gtcagacatg acttcatgaa tttgcttatt caacttatgg
1201 aaagaggttt tgttgatccc gaagataaca aaacgattat taacgaatca tcagccataa
1261 acaaacttac catgacagaa gctactgcgc aaagttttgc gttcttcgga gctggcttcg
1321 aaacttcctc gtcgacagta acatttgcat tatacgaatt atctcagtac caagatatac
1381 aagataaaac tcgtaacgaa attgatgaag ttttagcaaa gcatggtgaa ttgacctatg
1441 atgctgtaaa cgacatgaca tatcttcaaa aagtgataag tgaaactttg aggaaatatc
1501 cacctattcc tatcttgaat cgagtttgca ctgaagaaat agagctaccg aacattcgca
1561 taccgaaggg gacattaata actataccgc tgcttgggct gcatcgagat ccgtcgatat
1621 acccaaaccc ggagaaattt gatcctgagc gcttcaac
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