LOCUS LJ650701 980 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68830.graph_c4_seq6.
ACCESSION LJ650701
VERSION LJ650701.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 980)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..980
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68830.graph_c4_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 289 a 179 c 176 g 336 t
ORIGIN
1 ctattccttt atttttgtag gcatatttct gttgccgaac gcaacattgt cgattatgat
61 gccgtgggca cattttctgt taccgatcat gttacgtaca gcggagcaca gcgtgatttc
121 cgagactgtg attggttccg cgggatcgca tgatcggcct tgatttgtta ttgtcgttgt
181 gcccttatgc gcgttttgag agagctccga atttgacgcg cggttcggca gttctgccgg
241 agcagcctgc gagcactgta cataatacaa ggatactttg ctgacgacct ggctctcgtt
301 aatttgccta ccgactatcc atccttaata aaagccccta cattacagat tcgaggtgct
361 tgcggaatta attgcggctt ttatcgttat cttgagtagt gtgtacattt attataaata
421 tgtaatattt aatttctggc gtaagagagg tgtcttttat atcgagcctg cagtaccagt
481 tggaaatgta acacctcttg taactggaaa agcccaagta ggtatgcgat ttggctattt
541 acaaataaaa attgggcttg tgagtcttct gtcaaaatat aaatttaaac ttcattctcg
601 gaccccagtc ccgcttactt acagtgaaag gtctccgact ctcacaccaa aaagtggtgt
661 gcatcttatt atcgagaaac gataaaatta ttttcttctt gataaaaaat tacctctttt
721 aatttatata atacgaagaa tgtaaacatg gacatgtcaa aagtcaagat cggacaataa
781 attgaatcta tttaatatat tctactattt tgcgttacta acctttctta ttactatttt
841 ttactaatac ggttcagttc ttgttagtac tgcataatgt attataacta aaattattaa
901 taattatata tatattaaac aaaatatgta ttcttcttcc attaaagaat gtattctttc
961 agcaaaaaaa aaaaaaaaaa
//