LOCUS LJ650699 1627 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68830.graph_c4_seq4.
ACCESSION LJ650699
VERSION LJ650699.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1627)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1627
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68830.graph_c4_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 521 a 296 c 274 g 536 t
ORIGIN
1 tttttttttt tttttttatg atctcaattt gaatgtattc aaactctcat ttttacaaag
61 cgttgcgtaa ttcgacattc gttcattcgt cacatcgttt gcgggcaaga tcttatttct
121 attttgctta ttgcttgctc ggtcgactca ttcgttcgat gttcggttaa taactgtgcg
181 tcctacctat ttgctgttat gatcgctttt tttacatacc taaattcagg cttgtagcaa
241 atcgatccaa cattcaattt caaatataca caattgtttg ttttctaact ctcacatata
301 tatgcgtgta atttctatta tatataattt aaattttatc aaattgtgat tggtaattat
361 gttttggaat atattttatt tattacttaa ttttgcatct gttatataat tttatttcta
421 tttatttgac gatatatgtt actgaaagta tttttacgca acacaaaaag tcacacaatt
481 aaataaaaag aaaattttgt caacaggagt attcttcgat gatgtctatc tgaaatataa
541 ggaacatcat gcttttggaa tgtacacatt ttttaaacca aatttgataa tagccgatct
601 cgatcttata cgaacggtga tgacaaagga attcaaatct tttcatgatc gtgggatgtt
661 ctgtaacgaa aagattgatc ccttgactga ccatttgttc ctcacatctg gaaaaaaatg
721 gcgaaatatg cgcgccaaga tgacaccaac gtttacttcg ggaaaaatga agcagatgtt
781 tgttattctg aaagagtgtg gtgaagaact tgcaaagtat ctagatagta aagctcaaac
841 gagagattcc attgaaataa aagatacatt tggaagatat acaacagacg ttatcatgtc
901 agccgctttt ggtatcaaat ctaattgtat tgaggaaccc aataatgagt accgcgttca
961 aggaaaaaaa atttttgatt taaattctat taagctcgca ctggctatgt ttgcaccgca
1021 agtaatggac ttcctttcta ttcccatcac ggcacagtct gtcactgact tttatatgaa
1081 aatgtttcga gagactgtgg aatataggca aactaatcat atcgtcagac ctgactttgt
1141 gaacttgctc atacaactca tggagagggg ctacgttgat cctgaagatg acaaaaatac
1201 gtccaacgaa tcatcaactg taaataaact taccatggta gaagctactg cgcaaagttt
1261 tgtcttcttc gcagctggtt tcgaaacttc ctcatccgcg gcaacattcg ttttatacga
1321 attagcacaa catcaagatg tacaagagaa agttcacaat gaaatcgatg aaatattgaa
1381 aaagcatgat aatctaacct acgatgctat aaccgacatg acataccttc acaaagtaat
1441 aaatgaagct ttaagattat atccacctct cccaattttg aatcgaatct gcactcagga
1501 aatagacttg ccgactgtaa acattcgggt gccaaaagga acgttaataa caataccgat
1561 gcttgggctg catcgagatc cgtcgatata cccaaacccg gagaaatttg atcctgagcg
1621 cttcaac
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