LOCUS LJ650621 2146 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68474.graph_c1_seq3.
ACCESSION LJ650621
VERSION LJ650621.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2146)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2146
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68474.graph_c1_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 706 a 372 c 423 g 645 t
ORIGIN
1 gtgcaagcaa taccatgttt tagtgtgctg ttatatgggt aacaaatagc cagcaaactt
61 tgcacgcaat actcttgtta ataaacatat aagacgtatg ctaattgaac gaatattgtg
121 cgcacattgt ttgtatgagg ggttacacta cccagaaaat tttttttttt tcaaaatttg
181 tttatttgct taaatgatgt ataaactatt taaaaatgac gttcaaaaag aattttggtg
241 gaaaggctgt tataaataat tttttcagat ttttttcgga agcgcctctg agcgctccga
301 aacgtttaaa aaggccgctc gaccgcgcac aggattataa gggtattaca gctctgtcgg
361 tagttttagc aggtataggt gaattatagt tcttcaaaat atatatagat ggtgtaataa
421 atctcggaga tgtcgtagga cgccagaaaa accgttagaa ctggagtaaa cacgtcgcaa
481 cgagcatcgc ttgctagtcc gacgtacgcg ctcattttat ttagtttgtg cgttgttttt
541 cagtgcttta tttaacaaaa tgagtgaaaa agtatataac acaaagaaag gaaatagaac
601 aagaccatct cgggccagtc ggagcagaat ttctaacaga aaaccgccca accgccacag
661 cttcgagagc gacatcgagg gagtttcgag acttgcaaaa aaattaaaaa caacccatga
721 acatgaattc gaaattgacg caacgttcgg ataccggata ttgaactttg ttactgtttt
781 tgggatgctg tcacaaattt taaagtgtca gtgcggaggc agtgttactt tttcggaatc
841 atgcgtgcgt ggtcttggat tcaagctcgt tgtgttgtgt caaaagtgcg gaagtacttc
901 aattgacagc agtccattaa ttaatggtca tgcttacgat attaatagac gtgttacttt
961 tgctatgaga ataattggta tcggaaggca aggccgattc ttggtgctct tggcaaagag
1021 cgaaagcctc gcaaactctc gagatgtaca ctcacaaacc agctatgccc ctcttggttt
1081 tcaatgctgt acaaaaaatc tacgaagatt taacaagaga agaactcctc tcccgttgcc
1141 taggaggata tacgcaaaat gcaaacgaaa gtttgaactc tgtcgtttgg tcgattgcac
1201 cgaaagcgat atctagcggc aaagcagtag ttgatattga caccaacgta gccgtcataa
1261 catataatgg cggcttttca tcactgttag atgtagtatc aaccctcgaa ttgaagatta
1321 gtcccgagtt gcataattac gcaatggaaa tcgaccaaca tcgtgttcga gccgccaacc
1381 gctcatcgtc gatcaaccga aaaagcactc ggaaggatct tacggcactc aggaaggaga
1441 ctgacgagct aaattcgaat gtagaaggac agctatatgg agctgggata gcagagtaaa
1501 gatggcacac caggactgca acggtgcaca ccgtttttct cctacaaaaa aaattttttt
1561 tgttttttat actgccacga cgccattttg ttatacatat ataaataaaa aatatttttg
1621 agaactttaa tatatgtgta ataaagccct aaatttttgt tttgatccac cacctagaat
1681 tcaagaaaaa aattcacgaa aaagcttatt tttttcgacg cgcttgggta gtgtaactcc
1741 ttaataacct atactttaaa atcactatct gagggttttt gagattgttg aatccaaagt
1801 taaaaattca aaattcaaaa taacagatcc aatatggtga acaattatca aaattatcaa
1861 aattatcaaa atcaatcaaa tttgcttgaa atttgttatt tagatgtttt tgaagaagga
1921 tgtattacat ccatctttgc aaatgtgtta atttatcttt gtttacgaat ctaatgtcag
1981 aaaacaaagg attaaataaa ctatatacaa tgtatttctt aaatagtatc cattaattgt
2041 atagcgttat tctttattaa aaactgacaa ggagaacttc aaaagtgttc ttcgatgcca
2101 aaaaatcacg atggtaagta agggttaagt tgtttaagtt gtgtaa
//