LOCUS LJ650554 1624 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68506.graph_c2_seq4.
ACCESSION LJ650554
VERSION LJ650554.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1624)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1624
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68506.graph_c2_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 541 a 239 c 226 g 618 t
ORIGIN
1 gaaagcagtg gtatcaacgc cggcatacat cgacgacacg ctacgtatcg ttcaattgtg
61 aatgatcttg acggaacatt gggtacacag ttaaaaaatt tgtgttagat ttaatacatt
121 tttttatatt atatttcaaa cgctccactc aaattgttct attgatttaa atttaacgca
181 ggaatatgtt ggtaagcaac acgtattatg taaaaaagta acattttgat ataatttaga
241 aataaattgt gaaaacattt ctttagtaaa attaacagtt atgatatatc gattcgtaca
301 ttttatttgt ttttatttta gaatttagtt ttaaatgata catttgattt aatcgtaaat
361 tttgttattt taataaggat cggttttaac ataaatacaa aattttttct atcgtgtatc
421 ggttactatc gaacgtcaca cgttacttca tctaatcgtt cctgacgttg tacaaatgtc
481 gcaataagta cgatcagacg caatcgcgac ctcctcgagc ttcgcgtgtt tgtgtccgtt
541 cgatgaaagt catatttaag cggttttttt agctcggttt tttttttttt tgaacggttc
601 tcgttacact tcgtagagat acgccggata cgcgtttgta tcggttattt tataacattg
661 cgacacattt acataaacat atgtaattta ttacgtgaga attacatatt acattcttaa
721 tatttgtttt atatgcataa tatgcatttg aaaaacatcc aaacgcctaa cggtagcaat
781 atataataca taagtactat atatttttta acagtattat aaccaagttt tccttttcat
841 gcaaatttta aataaaatgt ttgtttattg cacatacaaa atttttctca gaaaaaactt
901 ttactttaaa aatttttcga tatttatgta gtcctacgta cgattttaag agaaaatttt
961 aagagacaat tttccccgtg tgtgctcgtt tcttaaattg ctatcgaata ttccatcagt
1021 catattacaa tttataaaag gcatttttaa taataaaatt tatttgcaat taatagaaaa
1081 ataaaaacat ttatgtaatt tttttatgcc taattcatta aaaatctgtc ttttgtgaac
1141 tcgatgtatc gcttacaatt tgtttaggaa agtacgatat aaagtacgat ataattgctt
1201 aaaataacat tctttctcgc tattatattt acattctata aatcgtacaa cacgtatctc
1261 gaacgcaaac aaatcgaaca taaataagtg caatgagacg tacattttat catgatttta
1321 gtggtagttc aaatgcatct taaattttga ctttatcgcg acacgcgtat gtatgaatga
1381 gataaaaata taggaagtgc aatgcactga aaattgaaaa caatctttcg tgctcgcctc
1441 gcgagcaaca ttttatacat atatctctca acattccacg tgaaatcaga tagtaaatat
1501 tactcacttt acacatgatt tatgattctt atccgatctg gatgaaattc tattcgtaat
1561 tttatatgat tttgacatac gcattttaat gaaatacata tgtttttaat gtttttaatg
1621 tttt
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