LOCUS LJ650551 1898 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68506.graph_c2_seq1.
ACCESSION LJ650551
VERSION LJ650551.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1898)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1898
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68506.graph_c2_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 616 a 290 c 288 g 704 t
ORIGIN
1 aagcagtggt ataaacgcaa agtgggagaa gcgcatttcg aaaggagtcc tcgacttatt
61 ttctcatgag gttacatctt tgtcaataat acgtcattcg gtagatatag tatatcttcc
121 gatgataacc ctcgcgatat tcttcctgag gatccgtttg attagtctag cgcgtgcgac
181 gagcgtggta acattggacg agtgcgtgag ttcgttctag agttcaagta tctatgcgtt
241 aaaaggcaga atataacggt atgtacacat ttttttctac aagcatcaat acgccggcat
301 acatcgacga cacgctacgt atcgttcaat tgtgaatgat cttgacggaa cattgggtac
361 acagttaaaa aatttgtgtt agatttaata cattttttta tattatattt caaacgctcc
421 actcaaattg ttctattgat ttaaatttaa cgcaggaata tgttggtaag caacacgtat
481 tatgtaaaaa agtaacattt tgatataatt tagaaataaa ttgtgaaaac atttctttag
541 taaaattaac agttatgata tatcgattcg tacattttat ttgtttttat tttagaattt
601 agttttaaat gatacatttg atttaatcgt aaattttgtt attttaataa ggatcggttt
661 taacataaat acaaaatttt ttctatcgtg tatcggttac tatcgaacgt cacacgttac
721 ttcatctaat cgttcctgac gttgtacaaa tgtcgcaata agtacgatca gacgcaatcg
781 cgacctcctc gagcttcgcg tgtttgtgtc cgttcgatga aagtcatatt taagcggttt
841 ttttagctcg gttttttttt tttttgaacg gttctcgtta cacttcgtag agatacgccg
901 gatacgcgtt tgtatcggtt attttataac attgcgacac atttacataa acatatgtaa
961 tttattacgt gagaattaca tattacattc ttaatatttg ttttatatgc ataatatgca
1021 tttgaaaaac atccaaacgc ctaacggtag caatatataa tacataagta ctatatattt
1081 tttaacagta ttataaccaa gttttccttt tcatgcaaat tttaaataaa atgtttgttt
1141 attgcacata caaaattttt ctcagaaaaa acttttactt taaaaatttt tcgatattta
1201 tgtagtccta cgtacgattt taagagaaaa ttttaagaga caattttccc cgtgtgtgct
1261 cgtttcttaa attgctatcg aatattccat cagtcatatt acaatttata aaaggcattt
1321 ttaataataa aatttatttg caattaatag aaaaataaaa acatttatgt aattttttta
1381 tgcctaattc attaaaaatc tgtcttttgt gaactcgatg tatcgcttac aatttgttta
1441 ggaaagtacg atataaagta cgatataatt gcttaaaata acattctttc tcgctattat
1501 atttacattc tataaatcgt acaacacgta tctcgaacgc aaacaaatcg aacataaata
1561 agtgcaatga gacgtacatt ttatcatgat tttagtggta gttcaaatgc atcttaaatt
1621 ttgactttat cgcgacacgc gtatgtatga atgagataaa aatataggaa gtgcaatgca
1681 ctgaaaattg aaaacaatct ttcgtgctcg cctcgcgagc aacattttat acatatatct
1741 ctcaacattc cacgtgaaat cagatagtaa atattactca ctttacacat gatttatgat
1801 tcttatccga tctggatgaa attctattcg taattttata tgattttgac atacgcattt
1861 taatgaaata catatgtttt taatgttttt aatgtttt
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