LOCUS LJ650397 4082 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq28.
ACCESSION LJ650397
VERSION LJ650397.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 4082)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4082
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq28"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1411 a 670 c 677 g 1324 t
ORIGIN
1 gagaacagta gaataaaaga tatagatgag agttccgaat cagatgaaag tgaaatggag
61 gcaaatgagt caacgaaccg attgcgcgtt ccagaatgtg gattttcttg ggacagtaaa
121 gcaaaattga ccgtttctac taatattgaa acgtctagcg acaacgagga gcctgaagag
181 gagcccaaac ggaagaagaa gaagctgagt gcggctgaac ggcgggagca agaacgacag
241 aaggaacgcg aaattcgcca acgagaggaa gctctagcga gtaatcagac acccaattcg
301 atcgatcaat tcgatagatt ggttttatcg agtcccgaca gctcgctagt gtggctgcgt
361 tacatggcgt atcatctgca ggccacagag atcgacaagg cacgagctgt tgcgagacga
421 gccatcaaaa caatcaattt cagagaggag aatgaacggc tgaatatatg gaacgcgtgg
481 cttaatctgg aatccagata cggcaccgca gagtccctga atgacgtttt tcaagaagcc
541 gtgaggacaa atgacgcgta taaggtgtat atgcacatgc tgactgtaca ggcggacgcc
601 ggtagaaaga atgagctcga gaaattgatc agtaccgtaa taggcaagtt caaacaggat
661 cctcagacgt ggatagactg tggtactgct ttgctgaaaa tcggcatgaa ggaaaaatca
721 cgacagatca tgcaacgggc attgcaatcc ttgcctgcgt ctcagcatat aaacctgcta
781 gtaagatttg cgaatttgga gaataaacta ggcgaccagg aacgcgcaca aacattgttc
841 gagaacatcc tgagttctta tccaaaacgc gtcgacgtgt ggtcgtgtta tgtggattgt
901 ttgataaaat ctgaaaacat tgatttagcc agaaaagtat tggaacgagc atgcgtccag
961 acgcttccac taagaaaaat gaaaaccctc ttcacaaaat ttataaattt cgaagaaaaa
1021 tacggtacat ctgaggctgt agctcgcgtg cgtcagatgg ctgcggatta tgtggaaaat
1081 catatataaa ttgtataata taagtttctt ttttttttca ttaaataatg ttaatttgac
1141 gcatatataa aatgtctcga atttaaatgt taaactttga gagtacatag gagattgata
1201 agaaaaaatc ttaaacattt gcttattctt attttgtttc aaagaaaata atgaacaaaa
1261 attttttatt tatttacact gggtccacat ataatttctt taattgatat tgttaataat
1321 tatttttttg taaatatagt tttgtccatc tgtattattt ttgatagaaa tgaaatgtga
1381 ttgtaaaatg acttaggaaa ccattgtttt ttagttctcc taggcactgt tgaagtttca
1441 acttttaaat tcgagttaaa ttttaaattt gataacttgt ataacgagta gaatatttct
1501 ctatcaattt tatatattta aaatttggta tcagcgatga ggtattacaa aaagattgca
1561 ggccatgggt aaattttcgt aaccatcaaa tgggcccaga gataattgaa aagcgatgac
1621 gttatcaact tagataaaaa tttgcaattt ttaacataaa tatttgattg atacattatt
1681 caattatact ataataatat ataattatac tataagttct atgagttcaa tgcggacacg
1741 actaaacaat gtgtgaaaaa gcctatcgga gctgattggc attgattaga gtagatcgac
1801 tctcattgtc tgacacccga cgacccatga ccaaccaatc tggttaatgg tgctatatac
1861 ttgaattatc taattagacc ttaaaataga acatatgacg tgattaaccc gacatgtccc
1921 acatattctt tttaattcaa atggactcaa aaaatctgaa gctcaaattc gaaaatatcg
1981 aaataaattt atttctatta atttcaatta atctttattt attgggtata tttcagtatt
2041 aacaatttgc tttgcgagac taagcgttct ttctctgtca gattctgtcg tttcatatta
2101 aaattgaata agtatatatc aaaatttgtg ataagatcca tattctaaat aattagcaca
2161 tttgtgatga atcataattt ttaaactaca ttatcatgga taattaatat atgctgatat
2221 tcttcgttcc attgatcaat caaacttttc ttaataccag tacagtaaag atcaatcttt
2281 tccagtttcg aacacttcaa taaaatctcg gaacatatgt cagatggtac aagtatgttt
2341 gacaaatcta agtattttaa gtttttgcac agcatcagtg ttgtcaaatc acgatcggtg
2401 attccctgaa aatttcctaa gttgatattt tccaagtgtt gacaagaaga taacaatcta
2461 tggaaactat cactactcca attgtagctt acacaccctc caatattcaa ttcctgtaaa
2521 tttttacact cagcaagagc atcaatacct tgccacgtaa tagagttttc tccttcgaaa
2581 tttatgcttt ccaaatttgg acatgaattt ttcaactcta ttgcaactac atccactgta
2641 ggcgtaccta ttagtacgcc tgctatgttc aagtcacgca tctgtcgatt attcctcagt
2701 atattacaaa gagtataaat ttctatataa tctatctctt gaagatgtaa acgttccaaa
2761 aattcgagtc tttcgagata cgaaactcct tcactggtta tatcttctcc acagtaattt
2821 agatccaatt ctaatataaa aaatacatat aaattaatca tatacatctt atctataatt
2881 ttaacaatta tatttacata catatatacg tttcaaattt ttagatatct ctgaaatttt
2941 acgtatagct aagtcattga tagaacgaca gtaatttagt ttcaggtgtg ttaatgtctg
3001 ccacatgtat caagaaaatc aataaattcc gaaacaagaa ataaacaaaa tgacagatcc
3061 aattgtgaca agtattcgca tctgggagca taataacgga atttagtagc tatatcagaa
3121 ttccaacacg taaagtgtgt atctctcatg ttcaagtttt tgtaaaacat agggtcccat
3181 gataaaatat tcaagtgttt attgacctga ctcatacaac gtaatgactg taaatctaat
3241 tttttaaata tttctaatat tatttcattt ggaaacatag aaaaattgga atgtgatagc
3301 ttcttggatt catctgaaga gaactgaata ttttctttaa actttttaca tttcgattca
3361 tcttttaaca aagagcaacc attatattct tgtttaggag attgagatac atgcttatat
3421 tcatgttcac atttatgaaa actctgtatt tcttttagaa ataatgaaat atttacgaaa
3481 ttccttttga agataatata tatcctcgta tccaatatct aaataaggaa tttcccctgg
3541 aatccatcta ctggaattct tgatatattt caatagataa gctaaatctt gattgggtct
3601 tttaggaagt attaattctg atgtaccgat aagcattaca gcagctagtt ttgtgcaatt
3661 aaaacttaaa atgctatttt gaaattctaa tctcagcatt acagttttaa atttacacaa
3721 tcgtaaaggc agtaaaaata gggttaaatc tcgttggaga caagatccat cacttttgtg
3781 ccataacata aaccactgat tatcataatt tttaacccaa attcgaacta agttatcaga
3841 attatctatt acgtgcatgc agagtttaat aggatataca gcttcatgaa actcaatatc
3901 tgcaaaatag aaaatacaat ctttttaaaa agagaactat acttttgaca aaatcttatc
3961 tattaatgca aattttacat actaataaaa tttgtattca tattgtattt gccaatccaa
4021 ttcaaaaatt ggcaatcaat taagttcagt tctacttcgt ctgatcttga ttcataagca
4081 gt
//