LOCUS LJ650395 3680 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq26.
ACCESSION LJ650395
VERSION LJ650395.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3680)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3680
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq26"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1287 a 581 c 549 g 1263 t
ORIGIN
1 tgcagtggta tcaacgcaga gtccctgaat gacgtttttc aagaagccgt gaggacaaat
61 gacgcgtata aggtgtatat gcacatgctg actgtacagg cggacgccgg tagaaagaat
121 gagctcgaga aattgatcag taccgtaata ggcaagttca aacaggatcc tcagacgtgg
181 atagactgtg gtactgcttt gctgaaaatc ggcatgaagg aaaaatcacg acagatcatg
241 caacgggcat tgcaatcctt gcctgcgtct cagcatataa acctgctagt aagatttgcg
301 aatttggaga ataaactagg cgaccaggaa cgcgcacaaa cattgttcga gaacatcctg
361 agttcttatc caaaacgcgt cgacgtgtgg tcgtgttatg tggattgttt gataaaatct
421 gaaaacattg atttagccag aaaagtattg gaacgagcat gcgtccagac gcttccacta
481 agaaaaatga aaaccctctt cacaaaattt ataaatttcg aagaaaaata cggtacatct
541 gaggctgtag ctcgcgtgcg tcagatggct gcggattatg tggaaaatca tatataaatt
601 gtataatata agtttctttt ttttttcatt aaataatgtt aatttgacgc atatataaaa
661 tgtctcgaat ttaaatgtta aactttgaga gtacatagga gattgataag aaaaaatctt
721 aaacatttgc ttattcttat tttgtttcaa agaaaataat gaacaaaaat tttttattta
781 tttacactgg gtccacatat aatttcttta attgatattg ttaataatta tttttttgta
841 aatatagttt tgtccatctg tattattttt gatagaaatg aaatgtgatt gtaaaatgac
901 ttaggaaacc attgtttttt agttctccta ggcactgttg aagtttcaac ttttaaattc
961 gagttaaatt ttaaatttga taacttgtat aacgagtaga atatttctct atcaatttta
1021 tatatttaaa atttggtatc agcgatgagg tattacaaaa agattgcagg ccatgggtaa
1081 attttcgtaa ccatcaaatg ggcccagaga taattgaaaa gcgatgacgt tatcaactta
1141 gataaaaatt tgcaattttt aacataaata tttgattgat acattattca attatactat
1201 aataatatat aattatacta taagttctat gagttcaatg cggacacgac taaacaatgt
1261 gtgaaaaagc ctatcggagc tgattggcat tgattagagt agatcgactc tcattgtctg
1321 acacccgacg acccatgacc aaccaatctg gttaatggtg ctatatactt gaattatcta
1381 attagacctt aaaatagaac atatgacgtg attaacccga catgtcccac atattctttt
1441 taattcaaat ggactcaaaa aatctgaagc tcaaattcga aaatatcgaa ataaatttat
1501 ttctattaat ttcaattaat ctttatttat tgggtatatt tcagtattaa caatttgctt
1561 tgcgagacta agcgttcttt ctctgtcaga ttctgtcgtt tcatattaaa attgaataag
1621 tatatatcaa aatttgtgat aagatccata ttctaaataa ttagcacatt tgtgatgaat
1681 cataattttt aaactacatt atcatggata attaatatat gctgatattc ttcgttccat
1741 tgatcaatca aacttttctt aataccagta cagtaaagat caatcttttc cagtttcgaa
1801 cacttcaata aaatctcgga acatatgtca gatggtacaa gtatgtttga caaatctaag
1861 tattttaagt ttttgcacag catcagtgtt gtcaaatcac gatcggtgat tccctgaaaa
1921 tttcctaagt tgatattttc caagtgttga caagaagata acaatctatg gaaactatca
1981 ctactccaat tgtagcttac acaccctcca atattcaatt cctgtaaatt tttacactca
2041 gcaagagcat caataccttg ccacgtaata gagttttctc cttcgaaatt tatgctttcc
2101 aaatttggac atgaattttt caactctatt gcaactacat ccactgtagg cgtacctatt
2161 agtacgcctg ctatgttcaa gtcacgcatc tgtcgattat tcctcagtat attacaaaga
2221 gtataaattt ctatataatc tatctcttga agatgtaaac gttccaaaaa ttcgagtctt
2281 tcgagatacg aaactccttc actggttata tcttctccac agtaatttag atccaattct
2341 aatataaaaa atacatataa attaatcata tacatcttat ctataatttt aacaattata
2401 tttacataca tatatacgtt tcaaattttt agatatctct gaaattttac gtatagctaa
2461 gtcattgata gaacgacagt aatttagttt caggtgtgtt aatgtctgcc acatgtatca
2521 agaaaatcaa taaattccga aacaagaaat aaacaaaatg acagatccaa ttgtgacaag
2581 tattcgcatc tgggagcata ataacggaat ttagtagcta tatcagaatt ccaacacgta
2641 aagtgtgtat ctctcatgtt caagtttttg taaaacatag ggtcccatga taaaatattc
2701 aagtgtttat tgacctgact catacaacgt aatgactgta aatctaattt tttaaatatt
2761 tctaatatta tttcattctg caaaaataaa ataatgttag tacaatacat gagataatat
2821 taacagtaaa tattattgtg ataaataaat ttcttaaaat actttactgg aaacatagaa
2881 aaattggaat gtgatagctt cttggattca tctgaagaga actgaatatt ttctttaaac
2941 tttttacatt tcgattcatc ttttaacaaa gagcaaccat tatattcttg tttaggagat
3001 tgagatacat gcttatattc atgttcacat ttatgaaaac tctgtatttc ttttagaaat
3061 aatgaaatat ttacgaaatt ccttttgaag ataatatata tcctcgtatc caatatctaa
3121 ataaggaatt tcccctggaa tccatctact ggaattcttg atatatttca atagataagc
3181 taaatcttga ttgggtcttt taggaagtat taattctgat gtaccgataa gcattacagc
3241 agctagtttt gtgcaattaa aacttaaaat gctattttga aattctaatc tcagcattac
3301 agttttaaat ttacacaatc gtaaaggcag taaaaatagg gttaaatctc gttggagaca
3361 agatccatca cttttgtgcc ataacataaa ccactgatta tcataatttt taacccaaat
3421 tcgaactaag ttatcagaat tatctattac gtgcatgcag agtttaatag gatatacagc
3481 ttcatgaaac tcaatatctg caaaatagaa aatacaatct ttttaaaaag agaactatac
3541 ttttgacaaa atcttatcta ttaatgcaaa ttttacatac taataaaatt tgtattcata
3601 ttgtatttgc caatccaatt caaaaattgg caatcaatta agttcagttc tacttcgtct
3661 gatcttgatt cataagcagt
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