LOCUS LJ650388 3102 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq19.
ACCESSION LJ650388
VERSION LJ650388.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3102)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3102
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq19"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1071 a 494 c 483 g 1054 t
ORIGIN
1 tgcagtggta tcaacgcaga gtccctgaat gacgtttttc aagaagccgt gaggacaaat
61 gacgcgtata aggtgtatat gcacatgctg actgtacagg cggacgccgg tagaaagaat
121 gagctcgaga aattgatcag taccgtaata ggcaagttca aacaggatcc tcagacgtgg
181 atagactgtg gtactgcttt gctgaaaatc ggcatgaagg aaaaatcacg acagatcatg
241 caacgggcat tgcaatcctt gcctgcgtct cagcatataa acctgctagt aagatttgcg
301 aatttggaga ataaactagg cgaccaggaa cgcgcacaaa cattgttcga gaacatcctg
361 agttcttatc caaaacgcgt cgacgtgtgg tcgtgttatg tggattgttt gataaaatct
421 gaaaacattg atttagccag aaaagtattg gaacgagcat gcgtccagac gcttccacta
481 agaaaaatga aaaccctctt cacaaaattt ataaatttcg aagaaaaata cggtacatct
541 gaggctgtag ctcgcgtgcg tcagatggct gcggattatg tggaaaatca tatataaatt
601 gtataatata agtttctttt ttttttcatt aaataatgtt aatttgacgc atatataaaa
661 tgtctcgaat ttaaatgtta aactttgaga gtacatagga gattgataag aaaaaatctt
721 aaacatttgc ttattcttat tttgtttcaa agaaaataat gaacaaaaat tttttattta
781 tttacactgg gtccacatat aatttcttta attgatattg ttaataatta tttttttgta
841 aatatagttt tgtccatctg tattattttt gatagaaatg aaatgtgatt gtaaaatgac
901 ttaggaaacc attgtttttt agttctccta ggcactgttg aagtttcaac ttttaaattc
961 gagttaaatt ttaaatttga taacttgtat aacgagtaga atatttctct atcaatttta
1021 tatatttaaa atttggtatc agcgatgagg tattacaaaa agattgcagg ccatgggtaa
1081 attttcgtaa ccatcaaatg ggcccagaga taattgaaaa gcgatgacgt tatcaactta
1141 gataaaaatt tgcaattttt aacataaata tttgattgat acattattca attatactat
1201 aataatatat aattatacta taagttctat gagttcaatg cggacacgac taaacaatgt
1261 gtgaaaaagc ctatcggagc tgattggcat tgattagagt agatcgactc tcattgtctg
1321 acacccgacg acccatgacc aaccaatctg gttaatggtg ctatatactt gaattatcta
1381 attagacctt aaaatagaac atatgacgtg attaacccga catgtcccac atattctttt
1441 taattcaaat ggactcaaaa aatctgaagc tcaaattcga aaatatcgaa ataaatttat
1501 ttctattaat ttcaattaat ctttatttat tgggtatatt tcagtattaa caatttgctt
1561 tgcgagacta agcgttcttt ctctgtcaga ttctgtcgtt tcatattaaa attgaataag
1621 tatatatcaa aatttgtgat aagatccata ttctaaataa ttagcacatt tgtgatgaat
1681 cataattttt aaactacatt atcatggata attaatatat gctgatattc ttcgttccat
1741 tgatcaatca aacttttctt aataccagta cagtaaagat caatcttttc cagtttcgaa
1801 cacttcaata aaatctcgga acatatgtca gatggtacaa gtatgtttga caaatctaag
1861 tattttaagt ttttgcacag catcagtgtt gtcaaatcac gatcggtgat tccctgaaaa
1921 tttcctaagt tgatattttc caagtgttga caagaagata acaatctatg gaaactatca
1981 ctactccaat tgtagcttac acacctgttg taaacgagtt atgattatta cagtccttca
2041 ttcgcaaata aaaaaatata gctgtttcaa aatgcatgta agacaggcaa acagatcgaa
2101 ttttcaatga aaatatggta atatgtatta aaaaaagtca cgtaccctcc aatattcaat
2161 tcctgtaaat ttttacactc agcaagagca tcaatacctt gccacgtaat agagttttct
2221 ccttcgaaat ttatgctttc caaatttgga catgaatttt tcaactctat tgcaactaca
2281 tccactgtag gcgtacctat tagtacgcct gctatgttca agtcacgcat ctgtcgatta
2341 ttcctcagta tattacaaag agtataaatt tctatataat ctatctcttg aagatgtaaa
2401 cgttccaaaa attcgagtct ttcgagatac gaaactcctt cactggttat atcttctcca
2461 cagtaattta gatccaattc taatataaaa aatacatata aattaatcat atacatctta
2521 tctataattt taacaattat atttacatac atatatacgt ttcaaatttt tagatatctc
2581 tgaaatttta cgtatagcta agtcattgat agaacgacag taatttagtt tcaggtgtgt
2641 taatgtctgc cacatgtatc aagaaaatca ataaattccg aaacaagaaa taaacaaaat
2701 gacagatcca attgtgacaa gtattcgcat ctgggagcat aataacggaa tttagtagct
2761 atatcagaat tccaacacgt aaagtgtgta tctctcatgt tcaagttttt gtaaaacata
2821 gggtcccatg ataaaatatt caagtgttta ttgacctgac tcatacaacg taatgactgt
2881 aaatctaatt ttttaaatat ttctaatatt atttcatttg gaaacataga aaaattggaa
2941 tgtgatagct tcttggattc atctgaagag aactgaatat tttctttaaa ctttttacat
3001 ttcgattcat cttttaacaa agagcaacca ttatattctt gtttaggaga ttgagataca
3061 tgcttatatt catgttcaca tttatgaaaa ctctgtattt ct
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