LOCUS LJ650387 3840 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq18.
ACCESSION LJ650387
VERSION LJ650387.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3840)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3840
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq18"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1256 a 663 c 717 g 1204 t
ORIGIN
1 gaaattcagc atggaattct ttatgtcttg gacaacaagt ggacgggggt tgcgattcta
61 gaacctcgct cgaactcgcg aatctacgac gtcgtagttc cagtccgttg cattgcaatg
121 ttccagcgca atccactgcg actgcggtgt actcgcacaa gcatcctgag ctcgacactg
181 ccgtttgcaa tgatttaaat ttaagtaccg acaataaggc tcatcctaat tgcgtctttc
241 atcattctca accacaaatg gtttgcggta ctgccaaatt gaatcgacat ttgtctagca
301 tctgtcagtc agagctagct gctacactgg gttccggcag ccaaataact agatctgaac
361 cagcgacgcg ttccaattca atagactgcg aaaacgatat cccgaagctg tcagtagcta
421 ataaaatcag ccacgacgtg gagtcggcta gattgcgtct agatctcatg gtgccaaacg
481 tactcttaga cagtaataaa attatgtcga agcatttact atctcgacga caatcgtctc
541 cgagttcatc cactagtatg aatttaataa atgacaatag caagatattt gagtttgaac
601 aattatttga aggcattcag ttgtcaccga gctcacagaa aaatgcttgt ggttcatcaa
661 ggaaaaacgg tttgtccgag acaaagaata atacttgcag tgccagtgga agttccgttg
721 cagtctcatt ggcgcaagag aatacatcat cacctacaag cactgctata acagtgaacg
781 ctatccctag tcctaatagt tacagctggt caccggcatt gtatacacac ggtcagaaag
841 ctgttttaga tatagctgta caaggttctt caaataatac tcttagtaag actattgata
901 agtccacaga ggaagctgcc agtttgccgt aataatttat tataactata gcagaatgtt
961 ctgtgatttc catttcatca aaatgttaat tataatcgcg aagtcgagag agaaaagaag
1021 aattctgtca aataggatct tgggatgaaa cgcatttaca ttgtacattt gactcttctc
1081 gtttctcgaa aatcaacaaa atatctctaa gatctgtgtt atgcattatg tagtacaaaa
1141 catatataat agctctattt tcagctgctg ctacgtatgc ggaattatta tccgtaaagt
1201 tgcattccaa gaaatgtgta aacagagttg agcaaaacag tattttaaat ataaaataca
1261 aaatattgac aattagtatt tgtattacaa aatactggca atttttcgct ttgaaatata
1321 aaacacaagc ttgtgttttg aatcaaaaga ttgctagtat tttgtaattt gaatactaat
1381 tgttaatatt ttgtattttg tatttgaaat actttttatc aagcactgat tgtatattac
1441 aaacgtctag attataaaat tataatctaa aaagatgaga taaaataaaa aaacgtccat
1501 tatcgatttt tcatggcgag aatgtattaa gttgaataaa taatagtaag tcatgtagaa
1561 atgttaaagt tacgtcaaga aaatatggtc aagtagtaaa atggcaattt attataggca
1621 atatattgac acgaattata caaagttgtt tattattctc gatcaattgt ttttgacatt
1681 aatgagtttt atagatacaa tcgccatttt aaaattttat tataaaaatt taattctgtg
1741 tatttttatt aagacttctt agtaagattt ttttagttta aataaaattt ttctattatg
1801 ctcgtaatga atttacaaat tttacgattg tatacactcc atacagagtc acaaagaaca
1861 tacattacat acatactata cttcggcatt gcgatcttag gtgaaaacag ttttgaaaca
1921 ctctatatgc cgtttgcttg gtaaaattga aacaaactat ttaacgtagg tctttcgtgt
1981 tttgttcgtc acaagttatc tcgaaaagat tatgatgaaa aacaagtaga agaatcagat
2041 agaagatgac gtgaaatact gcccacgaat ctagcgaacg aactgcgata acgattgctg
2101 cccagtaccg cttgtttgtc tctcattcac ttcagtctgc tttgtgctgt ctgccacgtg
2161 tgttgattgt aaccgtaata atgaccgatc aaagtcataa agcgggtgta atcaattttg
2221 gagctggtcc agctaaatta ccacatgagg ttctaaaaaa agtacaagaa gaattactct
2281 cgtacggaaa cacgcaaatc agcattcttg agttaagtca tcgatcgaat gacttcaaga
2341 aagttatcga tgatgcccag gctacactac gagacattct taatattccg gacaattaca
2401 aaatcttgtt catgcaagga ggcggtactg gaatttttgc ggcagttcct ctgaacatta
2461 tgaataccgg aactgcggat tatttagtaa ctggttcatg gtctgcaaaa gcggcaaaag
2521 aagcgactaa gtatggaaaa gttaatatgg ttctacctaa agttacaaaa tatacagaaa
2581 taccagattc ctccacttgg aacttagatg taaatgcatc atatgtttat tattgtgcca
2641 atgaaactgt gcatggaatt gaatttgatt atatcccgga aacaaatggc ataccacttg
2701 ttgctgatat gtcatccaat atacttacga aacctcttga gatatcaaag tttgcggtaa
2761 tttttgctgg agcacaaaaa aatattggac cggccggtgt tactttagta attgtacgag
2821 atgacatgct tggtcgtgct atggatgtat gtccgacagt gctgaatttt actgtcatgg
2881 cgaatgataa ttctttgcac aatacaccgc ctgtctttca aatatatatg gtgggcttgg
2941 tatttgaatg gattaaacgc aatggtggag tcgaaggtat gcaaaacttg gcaaagaaga
3001 agagcagcaa gatatatgat atcattgatg gatcaagagg attttacatg tgtcccatca
3061 agccagatgc acgtagtaaa atgaatattc cgttcagaat aaaaaacggt gatgaggaac
3121 tggaaaaaat gttcctttct ggtgccgcag ttcgcggtat gttgcagcta aaaggtcaca
3181 gatcagtggg tggaatacgc gcatctttgt ataatgcagt cacggaagaa gaagcggaaa
3241 tattggccga ctacatgaag tggttttatg attgcaaaac ggctgaaaaa taattttgaa
3301 aaatgatata atgagcttta aacgcatatg tttttacgat atctttgcta tacatgtgta
3361 tatctgtcat gttcgaagct tttttctcta actttaagaa agatacagtc ttgaccaaaa
3421 ttattatgca cttatattct ttttgtttat ctgaattttc ttagctgtat tattttatgt
3481 tgattactcc cacacagcat actttaaccc gggaatattc aacgaatgtc ttgttcgatg
3541 ttcaaaaaat gttcaaggaa ctttgtgaaa tgttgcaagt atatcattcc aaagcattca
3601 atgtgaaatg ttgcaagtat atcaaaacat cgtataggat caccgcacca gtcaatgaac
3661 aaataaatgc gcgctcttat tcggctgact ttaatatttt attacaagaa aattattgca
3721 aataccgcaa actgttatta aactttttga tttatcttaa tcccttttac ctcatcgtag
3781 taatctttat ccattggtct ggaaccctgt atacaaggtt aggcaaaagt ccggcaacgg
//