LOCUS LJ650380 4483 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq11.
ACCESSION LJ650380
VERSION LJ650380.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 4483)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4483
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq11"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1587 a 701 c 682 g 1513 t
ORIGIN
1 tgcagtggta tcaacgcaga gtccctgaat gacgtttttc aagaagccgt gaggacaaat
61 gacgcgtata aggtgtatat gcacatgctg actgtacagg cggacgccgg tagaaagaat
121 gagctcgaga aattgatcag taccgtaata ggcaagttca aacaggatcc tcagacgtgg
181 atagactgtg gtactgcttt gctgaaaatc ggcatgaagg aaaaatcacg acagatcatg
241 caacgggcat tgcaatcctt gcctgcgtct cagcatataa acctgctagt aagatttgcg
301 aatttggaga ataaactagg cgaccaggaa cgcgcacaaa cattgttcga gaacatcctg
361 agttcttatc caaaacgcgt cgacgtgtgg tcgtgttatg tggattgttt gataaaatct
421 gaaaacattg atttagccag aaaagtattg gaacgagcat gcgtccagac gcttccacta
481 agaaaaatga aaaccctctt cacaaaattt ataaatttcg aagaaaaata cggtacatct
541 gaggctgtag ctcgcgtgcg tcagatggct gcggattatg tggaaaatca catataatat
601 aaattgtata agtttttttt caataaataa atgttaattt aatacataca tattaaatgt
661 cccgaattta aatgttaaac tttgagagta cataggagat tgataagaaa aaatcttaaa
721 catttgctta ttcttatttt gtttcaaaga aaataatgaa caaaaatttt ttatttattt
781 acactgggtc cacatataat ttctttaatt gatattgtta ataattattt ttttgtaaat
841 atagttttgt ccatctgtat tatttttgat agaaatgaaa tgtgattgta aaatgactta
901 ggaaaccatt gttttttagt tctcctaggc actgttgaag tttcaacttt taaattcgag
961 ttaaatttta aatttgataa cttgtataac gagtagaata tttctctatc aattttatat
1021 atttaaaatt tggtatcagc gatgaggtat tacaaaaaga ttgcaggcca tgggtaaatt
1081 ttcgtaacca tcaaatgggc ccagagataa ttgaaaagcg atgacgttat caacttagat
1141 aaaaatttgc aatttttaac ataaatattt gattgataca ttattcaatt atactataat
1201 aatatataat tatactataa gttctatgag ttcaatgcgg acacgactaa acaatgtgtg
1261 aaaaagccta tcggagctga ttggcattga ttagagtaga tcgactctca ttgtctgaca
1321 cccgacgacc catgaccaac caatctggtt aatggtgcta tatacttgaa ttatctaatt
1381 agaccttaaa atagaacata tgacgtgatt aacccgacat gtcccacata ttctttttaa
1441 ttcaaatgga ctcaaaaaat ctgaagctca aattcgaaaa tatcgaaata aatttatttc
1501 tattaatttc aattaatctt tatttattgg gtatatttca gtattaacaa tttgctttgc
1561 gagactaagc gttctttctc tgtcagattc tgtcgtttca tattaaaatt gaataagtat
1621 atatcaaaat ttgtgataag atccatattc taaataatta gcacatttgt gatgaatcat
1681 aatttttaaa ctacattatc atggataatt aatatatgct gatattcttc gttccattga
1741 tcaatcaaac ttttcttaat accagtacag taaagatcaa tcttttccag tttcgaacac
1801 ttcaataaaa tctcggaaca tatgtcagat ggtacaagta tgtttgacaa atctaagtat
1861 tttaagtttt tgcacagcat cagtgttgtc aaatcacgat cggtgattcc ctgaaaattt
1921 cctaagttga tattttccaa gtgttgacaa gaagataaca atctatggaa actatcacta
1981 ctccaattgt agcttacaca ccctccaata ttcaattcct gtaaattttt acactcagca
2041 agagcatcaa taccttgcca cgtaatagag ttttctcctt cgaaatttat gctttccaaa
2101 tttggacatg aatttttcaa ctctattgca actacatcca ctgtaggcgt acctattagt
2161 acgcctgcta tgttcaagtc acgcatctgt cgattattcc tcagtatatt acaaagagta
2221 taaatttcta tataatctat ctcttgaaga tgtaaacgtt ccaaaaattc gagtctttcg
2281 agatacgaaa ctccttcact ggttatatct tctccacagt aatttagatc caattctaat
2341 ataaaaaata catataaatt aatcatatac atcttatcta taattttaac aattatattt
2401 acatacatat atacgtttca aatttttaga tatctctgaa attttacgta tagctaagtc
2461 attgatagaa cgacagtaat ttagtttcag gtgtgttaat gtctgccaca tgtatcaaga
2521 aaatcaataa attccgaaac aagaaataaa caaaatgaca gatccaattg tgacaagtat
2581 tcgcatctgg gagcataata acggaattta gtagctatat cagaattcca acacgtaaag
2641 tgtgtatctc tcatgttcaa gtttttgtaa aacatagggt cccatgataa aatattcaag
2701 tgtttattga cctgactcat acaacgtaat gactgtaaat ctaatttttt aaatatttct
2761 aatattattt cattctgcaa aaataaaata atgttagtac aatacatgag ataatattaa
2821 cagtaaatat tattgtgata aataaatttc ttaaaatact ttactggaaa catagaaaaa
2881 ttggaatgtg atagcttctt ggattcatct gaagagaact gaatattttc tttaaacttt
2941 ttacatttcg attcatcttt taacaaagag caaccattat attcttgttt aggagattga
3001 gatacatgct tatattcatg ttcacattta tgaaaactct gtatttcttt tagaaataat
3061 gaaatattta cgaaattcct tttgaagata atatatatcc tcgtatccaa tatctaaata
3121 aggaatttcc cctggaatcc atctactgga attcttgata tatttcaata gataagctaa
3181 atcttgattg ggtcttttag gaagtattaa ttctgatgta ccgataagca ttacagcagc
3241 tagttttgtg caattaaaac ttaaaatgct attttgaaat tctaatctca gcattacagt
3301 tttaaattta cacaatcgta aaggcagtaa aaatagggtt aaatctcgtt ggagacaaga
3361 tccatcactt ttgtgccata acataaacca ctgattatca taatttttaa cccaaattcg
3421 aactaagtta tcagaattat ctattacgtg catgcagagt ttaataggat atacagcttc
3481 atgaaactca atatctgcaa aatagaaaat acaatctttt taaaaagaga actatacttt
3541 tgacaaaatc ttatctatta atgcaaattt tacatactaa taaaatttgt attcatattg
3601 tatttgccaa tccaattcaa aaattggcaa tcaattaagt tcagttctac ttcgtctgat
3661 cttgattcat aagcagtcta caattaaaat atatcagtta acttaaaagt tacaaattgc
3721 ggtgttaaat attacagaat aaagtagtgg aaaggtagaa tgtgattaaa tagataggtt
3781 atacaatgtg ttataattgt agtcagtaac atacctcatc aaacggctga caagaattgt
3841 cataatttgt atatttctca ggtggtccaa ttatgttatc aaaacaagat gtgttacgat
3901 tatcccattg gtaaaaaaat ttatttttta caaattgata aacaaaatcc gttttataat
3961 cgtcctctcc tacagatatt ttgtcaatgt agggatattt attagcattc tcataataaa
4021 aaagaacacc tgaatgaaga atgtggccgt tgccatattt ttttctctaa aagaaaatga
4081 aacgctttca ttaaaaaaaa aaatcctttt cacaaaaatt acaaatttcg aagcaaaata
4141 tggtatgtat gtacatccga gactgtagct tgcgtgcagc agatagctgc ggattatgtg
4201 aaaaaacaca taaagtttgt ttgttttttt ttttttttca ataaatatat aatttattaa
4261 atgcaatgtg atgaaatggt gtaacaatag aggggcgggc gaaacggcga ccgttaatga
4321 tcgccgcgaa ggcggacaag agataatacg ccacccccgc ccgacgcccc cccggagatc
4381 ggaaatatag ataaaatatt ttcgttatta tttacaatat tagtcgaacg ttagtcaata
4441 aataataaac agtggcataa tccctttatt taatataatt taa
//