LOCUS LJ650379 5026 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq10.
ACCESSION LJ650379
VERSION LJ650379.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 5026)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5026
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq10"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1771 a 809 c 831 g 1615 t
ORIGIN
1 gagaacagta gaataaaaga tatagatgag agttccgaat cagatgaaag tgaaatggag
61 gcaaatgagt caacgaaccg attgcgcgtt ccagaatgtg gattttcttg ggacagtaaa
121 gcaaaattga ccgtttctac taatattgaa acgtctagcg acaacgagga gccagaagag
181 gaacccaaac ggaagaagaa gaagctgagt gcggctgaac ggcgggagca agaacgacag
241 aaggaacgcg aaattcgcca acgagaggaa gctctagcga gtaatcagac acccaattcg
301 atcgatcaat tcgatagatt ggttttatcg agtcccgaca gctcgctagt gtggctgcgt
361 tacatggcgt atcatctgca ggccacagag atcgacaagg cacgagctgt tgcgagacga
421 gccatcaaaa caatcaattt cagagaggag aatgaacggc tgaatatatg gaacgcgtgg
481 cttaatctgg aatccagata cggcaccgca gagtccctga atgacgtttt tcaagaagcc
541 gtgaggacaa atgacgcgta taaggtgtat atgcacatgc tgactgtaca ggcggacgcc
601 ggtagaaaga atgagctcga gaaattgatc agtaccgtaa taggcaagtt caaacaggat
661 cctcagacgt ggatagactg tggtactgct ttgctgaaaa tcggcatgaa ggaaaaatca
721 cgacagatca tgcaacgggc attgcaatcc ttgcctgcgt ctcagcatat aaacctgcta
781 gtaagatttg cgaatttgga gaataaacta ggcgaccagg aacgcgcaca aacattgttc
841 gagaacatcc tgagttctta tccaaaacgc gtcgacgtgt ggtcgtgtta tgtggattgt
901 ttgataaaat ctgaaaacat tgatttagcc agaaaagtat tggaacgagc atgcgtccag
961 acgcttccac taagaaaaat gaaaaccctc ttcacaaaat ttataaattt cgaagaaaaa
1021 tacggtacat ctgaggctgt agctcgcgtg cgtcagatgg ctgcggatta tgtggaaaat
1081 cacatataat ataaattgta taagtttttt ttcaataaat aaatgttaat ttaatacata
1141 catattaaat gtcccgaatt taaatgttaa actttgagag tacataggag attgataaga
1201 aaaaatctta aacatttgct tattcttatt ttgtttcaaa gaaaataatg aacaaaaatt
1261 ttttatttat ttacactggg tccacatata atttctttaa ttgatattgt taataattat
1321 ttttttgtaa atatagtttt gtccatctgt attatttttg atagaaatga aatgtgattg
1381 taaaatgact taggaaacca ttgtttttta gttctcctag gcactgttga agtttcaact
1441 tttaaattcg agttaaattt taaatttgat aacttgtata acgagtagaa tatttctcta
1501 tcaattttat atatttaaaa tttggtatca gcgatgaggt attacaaaaa gattgcaggc
1561 catgggtaaa ttttcgtaac catcaaatgg gcccagagat aattgaaaag cgatgacgtt
1621 atcaacttag ataaaaattt gcaattttta acataaatat ttgattgata cattattcaa
1681 ttatactata ataatatata attatactat aagttctatg agttcaatgc ggacacgact
1741 aaacaatgtg tgaaaaagcc tatcggagct gattggcatt gattagagta gatcgactct
1801 cattgtctga cacccgacga cccatgacca accaatctgg ttaatggtgc tatatacttg
1861 aattatctaa ttagacctta aaatagaaca tatgacgtga ttaacccgac atgtcccaca
1921 tattcttttt aattcaaatg gactcaaaaa atctgaagct caaattcgaa aatatcgaaa
1981 taaatttatt tctattaatt tcaattaatc tttatttatt gggtatattt cagtattaac
2041 aatttgcttt gcgagactaa gcgttctttc tctgtcagat tctgtcgttt catattaaaa
2101 ttgaataagt atatatcaaa atttgtgata agatccatat tctaaataat tagcacattt
2161 gtgatgaatc ataattttta aactacatta tcatggataa ttaatatatg ctgatattct
2221 tcgttccatt gatcaatcaa acttttctta ataccagtac agtaaagatc aatcttttcc
2281 agtttcgaac acttcaataa aatctcggaa catatgtcag atggtacaag tatgtttgac
2341 aaatctaagt attttaagtt tttgcacagc atcagtgttg tcaaatcacg atcggtgatt
2401 ccctgaaaat ttcctaagtt gatattttcc aagtgttgac aagaagataa caatctatgg
2461 aaactatcac tactccaatt gtagcttaca cacctgttgt aaacgagtta tgattattac
2521 agtccttcat tcgcaaataa aaaaatatag ctgtttcaaa atgcatgtaa gacaggcaaa
2581 cagatcgaat tttcaatgaa aatatggtaa tatgtattaa aaaaagtcac gtaccctcca
2641 atattcaatt cctgtaaatt tttacactca gcaagagcat caataccttg ccacgtaata
2701 gagttttctc cttcgaaatt tatgctttcc aaatttggac atgaattttt caactctatt
2761 gcaactacat ccactgtagg cgtacctatt agtacgcctg ctatgttcaa gtcacgcatc
2821 tgtcgattat tcctcagtat attacaaaga gtataaattt ctatataatc tatctcttga
2881 agatgtaaac gttccaaaaa ttcgagtctt tcgagatacg aaactccttc actggttata
2941 tcttctccac agtaatttag atccaattct aatataaaaa atacatataa attaatcata
3001 tacatcttat ctataatttt aacaattata tttacataca tatatacgtt tcaaattttt
3061 agatatctct gaaattttac gtatagctaa gtcattgata gaacgacagt aatttagttt
3121 caggtgtgtt aatgtctgcc acatgtatca agaaaatcaa taaattccga aacaagaaat
3181 aaacaaaatg acagatccaa ttgtgacaag tattcgcatc tgggagcata ataacggaat
3241 ttagtagcta tatcagaatt ccaacacgta aagtgtgtat ctctcatgtt caagtttttg
3301 taaaacatag ggtcccatga taaaatattc aagtgtttat tgacctgact catacaacgt
3361 aatgactgta aatctaattt tttaaatatt tctaatatta tttcatttgg aaacatagaa
3421 aaattggaat gtgatagctt cttggattca tctgaagaga actgaatatt ttctttaaac
3481 tttttacatt tcgattcatc ttttaacaaa gagcaaccat tatattcttg tttaggagat
3541 tgagatacat gcttatattc atgttcacat ttatgaaaac tctgtatttc ttttagaaat
3601 aatgaaatat ttacgaaatt ccttttgaag ataatatata tcctcgtatc caatatctaa
3661 ataaggaatt tcccctggaa tccatctact ggaattcttg atatatttca atagataagc
3721 taaatcttga ttgggtcttt taggaagtat taattctgat gtaccgataa gcattacagc
3781 agctagtttt gtgcaattaa aacttaaaat gctattttga aattctaatc tcagcattac
3841 agttttaaat ttacacaatc gtaaaggcag taaaaatagg gttaaatctc gttggagaca
3901 agatccatca cttttgtgcc ataacataaa ccactgatta tcataatttt taacccaaat
3961 tcgaactaag ttatcagaat tatctattac gtgcatgcag agtttaatag gatatacagc
4021 ttcatgaaac tcaatatctg caaaatagaa aatacaatct ttttaaaaag agaactatac
4081 ttttgacaaa atcttatcta ttaatgcaaa ttttacatac taataaaatt tgtattcata
4141 ttgtatttgc caatccaatt caaaaattgg caatcaatta agttcagttc tacttcgtct
4201 gatcttgatt cataagcagt ctacaattaa aatatatcag ttaacttaaa agttacaaat
4261 tgcggtgtta aatattacag aataaagtag tggaaaggta gaatgtgatt aaatagatag
4321 gttatacaat gtgttataat tgtagtcagt aacatacctc atcaaacggc tgacaagaat
4381 tgtcataatt tgtatatttc tcaggtggtc caattatgtt atcaaaacaa gatgtgttac
4441 gattatccca ttggtaaaaa aatttatttt ttacaaattg ataaacaaaa tccgttttat
4501 aatcgtcctc tcctacagat attttgtcaa tgtagggata tttattagca ttctcataat
4561 aaaaaagaac acctgaatga agaatgtggc cgttgccata tttttttctc taaaagaaaa
4621 tgaaacgctt tcattaaaaa aaaaaatcct tttcacaaaa attacaaatt tcgaagcaaa
4681 atatggtatg tatgtacatc cgagactgta gcttgcgtgc agcagatagc tgcggattat
4741 gtgaaaaaac acataaagtt tgtttgtttt tttttttttt tcaataaata tataatttat
4801 taaatgcaat gtgatgaaat ggtgtaacaa tagaggggcg ggcgaaacgg cgaccgttaa
4861 tgatcgccgc gaaggcggac aagagataat acgccacccc cgcccgacgc ccccccggag
4921 atcggaaata tagataaaat attttcgtta ttatttacaa tattagtcga acgttagtca
4981 ataaataata aacagtggca taatcccttt atttaatata atttaa
//