LOCUS LJ650374 1543 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq5.
ACCESSION LJ650374
VERSION LJ650374.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1543)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1543
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 508 a 283 c 285 g 467 t
ORIGIN
1 gaaattcagc atggaattct ttatgtcttg gacaacaagt ggacgggggt tgcgattcta
61 gaacctcgct cgaactcgcg aatctacgac gtcgtagttc cagtccgttg cattgcaatg
121 ttccagcgca atccactgcg actgcggtgt actcgcacaa gcatcctgag ctcgacactg
181 ccgtttgcaa tgatttaaat ttaagtaccg acaataaggc tcatcctaat tgcgtctttc
241 atcattctca accacaaatg gtttgcggta ctgccaaatt gaatcgacat ttgtctagca
301 tctgtcagtc agagctagct gctacactgg gttccggcag ccaaataact agatctgaac
361 cagcgacgcg ttccaattca atagactgcg aaaacgatat cccgaagctg tcagtagcta
421 ataaaatcag ccacgacgtg gagtcggcta gattgcgtct agatctcatg gtgccaaacg
481 tactcttaga cagtaataaa attatgtcga agcatttact atctcgacga caatcgtctc
541 cgagttcatc cactagtatg aatttaataa atgacaatag caagatattt gagtttgaac
601 aattatttga aggcattcag ttgtcaccga gctcacagaa aaatgcttgt ggttcatcaa
661 ggaaaaacgg tttgtccgag acaaagaata atacttgcag tgccagtgga agttccgttg
721 cagtctcatt ggcgcaagag aatacatcat cacctacaag cactgctata acagtgaacg
781 ctatccctag tcctaatagt tacagctggt caccggcatt gtatacacac ggtcagaaag
841 ctgttttaga tatagctgta caaggttctt caaataatac tcttagtaag actattgata
901 agtccacaga ggaagctgcc agtttgccgt aataatttat tataactata gcagaatgtt
961 ctgtgatttc catttcatca aaatgttaat tataatcgcg aagtcgagag agaaaagaag
1021 aattctgtca aataggatct tgggatgaaa cgcatttaca ttgtacattt gactcttctc
1081 gtttctcgaa aatcaacaaa atatctctaa gatctgtgtt atgcattatg tagtacaaaa
1141 catatataat agctctattt tcagctgcag tatgcggaat tattatccgt aaagttgcat
1201 tccaagaaat gtgtaaacag agttgagcaa aacagtattt taaatataaa atacaaaata
1261 ttgacaatta gtatttgtat tacaaaatac tggcaatttt tcgctttgaa atataaaaca
1321 caagcttgtg ttttgaatca aaagattgct agtattttgt aatttgaata ctaattgtta
1381 atattttgta ttttgtattt gaaatacttt ttgcctagcc ctgtgtgtag gctagattca
1441 ttagaatata ttatttaata ttatttattt ctcacatgtg tgagttatac gtccagagag
1501 agtaaaataa ataaaaatta gtaataaaaa aaaaaaaaaa aaa
//