LOCUS LJ650372 3621 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq3.
ACCESSION LJ650372
VERSION LJ650372.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3621)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3621
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1272 a 586 c 609 g 1154 t
ORIGIN
1 gagaacagta gaataaaaga tatagatgag agttccgaat cagatgaaag tgaaatggag
61 gcaaatgagt caacgaaccg attgcgcgtt ccagaatgtg gattttcttg ggacagtaaa
121 gcaaaattga ccgtttctac taatattgaa acgtctagcg acaacgagga gccagaagag
181 gaacccaaac ggaagaagaa gaagctgagt gcggctgaac ggcgggagca agaacgacag
241 aaggaacgcg aaattcgcca acgagaggaa gctctagcga gtaatcagac acccaattcg
301 atcgatcaat tcgatagatt ggttttatcg agtcccgaca gctcgctagt gtggctgcgt
361 tacatggcgt atcatctgca ggccacagag atcgacaagg cacgagctgt tgcgagacga
421 gccatcaaaa caatcaattt cagagaggag aatgaacggc taaacatatg gaacgcgtgg
481 cttaatctgg aatccagata cggcaccgca gagtccctga atgacgtttt tcaagaagcc
541 gtgaggacaa atgacgcgta taaggtgtat atgcacatgc tgactgtaca ggcggacgcc
601 ggtagaaaga atgagctcga gaaattgatc agtaccgtaa taggcaagtt caaacaggat
661 cctcagacgt ggatagactg tggtactgct ttgctgaaaa tcggcatgaa ggaaaaatca
721 cgacagatca tgcaacgggc attgcaatcc ttgcctgcgt ctcagcatat aaacctgcta
781 gtaagatttg cgaatttgga gaataaacta ggcgaccagg aacgcgcaca aacattgttc
841 gagaacatcc tgagttctta tccaaaacgc gtcgacgtgt ggtcgtgtta tgtggattgt
901 ttgataaaat ctgaaaacat tgatttagcc agaaaagtat tggaacgagc atgcgtccag
961 acgcttccac taagaaaaat gaaaaccctc ttcacaaaat ttataaattt cgaagaaaaa
1021 tacggtacat ctgaggctgt agctcgcgtg cgtcagatgg ctgcggatta tgtggaaaat
1081 cacatataat ataaattgta taagtttttt ttcaataaat aaatgttaat ttaatacata
1141 catattaaat gtcccgaatt taaatgttaa actttgagag tacataggag attgataaga
1201 aaaaatctta aacatttgct tattcttatt ttgtttcaaa gaaaataatg aacaaaaatt
1261 ttttatttat ttacactggg tccacatata atttctttaa ttgatattgt taataattat
1321 ttttttgtaa atatagtttt gtccatctgt attatttttg atagaaatga aatgtgattg
1381 taaaatgact taggaaacca ttgtttttta gttctcctag gcactgttga agtttcaact
1441 tttaaattcg agttaaattt taaatttgat aacttgtata acgagtagaa tatttctcta
1501 tcaattttat atatttaaaa tttggtatca gcgatgaggt attacaaaaa gattgcaggc
1561 catgggtaaa ttttcgtaac catcaaatgg gcccagagat aattgaaaag cgatgacgtt
1621 atcaacttag ataaaaattt gcaattttta acataaatat ttgattgata cattattcaa
1681 ttatactata ataatatata attatactat aagttctatg agttcaatgc ggacacgact
1741 aaacaatgtg tgaaaaagcc tatcggagct gattggcatt gattagagta gatcgactct
1801 cattgtctga cacccgacga cccatgacca accaatctgg ttaatggtgc tatatacttg
1861 aattatctaa ttagacctta aaatagaaca tatgacgtga ttaacccgac atgtcccaca
1921 tattcttttt aattcaaatg gactcaaaaa atctgaagct caaattcgaa aatatcgaaa
1981 taaatttatt tctattaatt tcaattaatc tttatttatt gggtatattt cagtattaac
2041 aatttgcttt gcgagactaa gcgttctttc tctgtcagat tctgtcgttt catattaaaa
2101 ttgaataagt atatatcaaa atttgtgata agatccatat tctaaataat tagcacattt
2161 gtgatgaatc ataattttta aactacatta tcatggataa ttaatatatg ctgatattct
2221 tcgttccatt gatcaatcaa acttttctta ataccagtac agtaaagatc aatcttttcc
2281 agtttcgaac acttcaataa aatctcggaa catatgtcag atggtacaag tatgtttgac
2341 aaatctaagt attttaagtt tttgcacagc atcagtgttg tcaaatcacg atcggtgatt
2401 ccctgaaaat ttcctaagtt gatattttcc aagtgttgac aagaagataa caatctatgg
2461 aaactatcac tactccaatt gtagcttaca caccctccaa tattcaattc ctgtaaattt
2521 ttacactcag caagagcatc aataccttgc cacgtaatag agttttctcc ttcgaaattt
2581 atgctttcca aatttggaca tgaatttttc aactctattg caactacatc cactgtaggc
2641 gtacctatta gtacgcctgc tatgttcaag tcacgcatct gtcgattatt cctcagtata
2701 ttacaaagag tataaatttc tatataatct atctcttgaa gatgtaaacg ttccaaaaat
2761 tcgagtcttt cgagatacga aactccttca ctggttatat cttctccaca gtaatttaga
2821 tccaattcta atataaaaaa tacatataaa ttaatcatat acatcttatc tataatttta
2881 acaattatat ttacatacat atatacgttt caaattttta gatatctctg aaattttacg
2941 tatagctaag tcattgatag aacgacagta atttagtttc aggtgtgtta atgtctgcca
3001 catgtatcaa gaaaatcaat aaattccgaa acaagaaata aacaaaatga cagatccaat
3061 tgtgacaagt attcgcatct gggagcataa taacggaatt tagtagctat atcagaattc
3121 caacacgtaa agtgtgtatc tctcatgttc aagtttttgt aaaacatagg gtcccatgat
3181 aaaatattca agtgtttatt gacctgactc atacaacgta atgactgtaa atctaatttt
3241 ttaaatattt ctaatattat ttcattctgc aaaaataaaa taatgttagt acaatacatg
3301 agataatatt aacagtaaat attattgtga taaataaatt tcttaaaata ctttactgga
3361 aacatagaaa aattggaatg tgatagcttc ttggattcat ctgaagagaa ctgaatattt
3421 tctttaaact ttttacattt cgattcatct tttaacaaag agcaaccatt atattcttgt
3481 ttaggagatt gagatacatg cttatattca tgttcacatt tatgaaaact ctgtatttct
3541 gcaagcaaca tttgagtaaa ttaattttta tctttaagag aataaagaaa tattgaattt
3601 attatttaaa aaaaaaaaaa a
//