LOCUS LJ650370 4627 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68915.graph_c0_seq1.
ACCESSION LJ650370
VERSION LJ650370.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 4627)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4627
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68915.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1641 a 719 c 706 g 1561 t
ORIGIN
1 tgcagtggta tcaacgcaga gtccctgaat gacgtttttc aagaagccgt gaggacaaat
61 gacgcgtata aggtgtatat gcacatgctg actgtacagg cggacgccgg tagaaagaat
121 gagctcgaga aattgatcag taccgtaata ggcaagttca aacaggatcc tcagacgtgg
181 atagactgtg gtactgcttt gctgaaaatc ggcatgaagg aaaaatcacg acagatcatg
241 caacgggcat tgcaatcctt gcctgcgtct cagcatataa acctgctagt aagatttgcg
301 aatttggaga ataaactagg cgaccaggaa cgcgcacaaa cattgttcga gaacatcctg
361 agttcttatc caaaacgcgt cgacgtgtgg tcgtgttatg tggattgttt gataaaatct
421 gaaaacattg atttagccag aaaagtattg gaacgagcat gcgtccagac gcttccacta
481 agaaaaatga aaaccctctt cacaaaattt ataaatttcg aagaaaaata cggtacatct
541 gaggctgtag ctcgcgtgcg tcagatggct gcggattatg tggaaaatca tatataaatt
601 gtataatata agtttctttt ttttttcatt aaataatgtt aatttgacgc atatataaaa
661 tgtctcgaat ttaaatgtta aactttgaga gtacatagga gattgataag aaaaaatctt
721 aaacatttgc ttattcttat tttgtttcaa agaaaataat gaacaaaaat tttttattta
781 tttacactgg gtccacatat aatttcttta attgatattg ttaataatta tttttttgta
841 aatatagttt tgtccatctg tattattttt gatagaaatg aaatgtgatt gtaaaatgac
901 ttaggaaacc attgtttttt agttctccta ggcactgttg aagtttcaac ttttaaattc
961 gagttaaatt ttaaatttga taacttgtat aacgagtaga atatttctct atcaatttta
1021 tatatttaaa atttggtatc agcgatgagg tattacaaaa agattgcagg ccatgggtaa
1081 attttcgtaa ccatcaaatg ggcccagaga taattgaaaa gcgatgacgt tatcaactta
1141 gataaaaatt tgcaattttt aacataaata tttgattgat acattattca attatactat
1201 aataatatat aattatacta taagttctat gagttcaatg cggacacgac taaacaatgt
1261 gtgaaaaagc ctatcggagc tgattggcat tgattagagt agatcgactc tcattgtctg
1321 acacccgacg acccatgacc aaccaatctg gttaatggtg ctatatactt gaattatcta
1381 attagacctt aaaatagaac atatgacgtg attaacccga catgtcccac atattctttt
1441 taattcaaat ggactcaaaa aatctgaagc tcaaattcga aaatatcgaa ataaatttat
1501 ttctattaat ttcaattaat ctttatttat tgggtatatt tcagtattaa caatttgctt
1561 tgcgagacta agcgttcttt ctctgtcaga ttctgtcgtt tcatattaaa attgaataag
1621 tatatatcaa aatttgtgat aagatccata ttctaaataa ttagcacatt tgtgatgaat
1681 cataattttt aaactacatt atcatggata attaatatat gctgatattc ttcgttccat
1741 tgatcaatca aacttttctt aataccagta cagtaaagat caatcttttc cagtttcgaa
1801 cacttcaata aaatctcgga acatatgtca gatggtacaa gtatgtttga caaatctaag
1861 tattttaagt ttttgcacag catcagtgtt gtcaaatcac gatcggtgat tccctgaaaa
1921 tttcctaagt tgatattttc caagtgttga caagaagata acaatctatg gaaactatca
1981 ctactccaat tgtagcttac acacctgttg taaacgagtt atgattatta cagtccttca
2041 ttcgcaaata aaaaaatata gctgtttcaa aatgcatgta agacaggcaa acagatcgaa
2101 ttttcaatga aaatatggta atatgtatta aaaaaagtca cgtaccctcc aatattcaat
2161 tcctgtaaat ttttacactc agcaagagca tcaatacctt gccacgtaat agagttttct
2221 ccttcgaaat ttatgctttc caaatttgga catgaatttt tcaactctat tgcaactaca
2281 tccactgtag gcgtacctat tagtacgcct gctatgttca agtcacgcat ctgtcgatta
2341 ttcctcagta tattacaaag agtataaatt tctatataat ctatctcttg aagatgtaaa
2401 cgttccaaaa attcgagtct ttcgagatac gaaactcctt cactggttat atcttctcca
2461 cagtaattta gatccaattc taatataaaa aatacatata aattaatcat atacatctta
2521 tctataattt taacaattat atttacatac atatatacgt ttcaaatttt tagatatctc
2581 tgaaatttta cgtatagcta agtcattgat agaacgacag taatttagtt tcaggtgtgt
2641 taatgtctgc cacatgtatc aagaaaatca ataaattccg aaacaagaaa taaacaaaat
2701 gacagatcca attgtgacaa gtattcgcat ctgggagcat aataacggaa tttagtagct
2761 atatcagaat tccaacacgt aaagtgtgta tctctcatgt tcaagttttt gtaaaacata
2821 gggtcccatg ataaaatatt caagtgttta ttgacctgac tcatacaacg taatgactgt
2881 aaatctaatt ttttaaatat ttctaatatt atttcattct gcaaaaataa aataatgtta
2941 gtacaataca tgagataata ttaacagtaa atattattgt gataaataaa tttcttaaaa
3001 tactttactg gaaacataga aaaattggaa tgtgatagct tcttggattc atctgaagag
3061 aactgaatat tttctttaaa ctttttacat ttcgattcat cttttaacaa agagcaacca
3121 ttatattctt gtttaggaga ttgagataca tgcttatatt catgttcaca tttatgaaaa
3181 ctctgtattt cttttagaaa taatgaaata tttacgaaat tccttttgaa gataatatat
3241 atcctcgtat ccaatatcta aataaggaat ttcccctgga atccatctac tggaattctt
3301 gatatatttc aatagataag ctaaatcttg attgggtctt ttaggaagta ttaattctga
3361 tgtaccgata agcattacag cagctagttt tgtgcaatta aaacttaaaa tgctattttg
3421 aaattctaat ctcagcatta cagttttaaa tttacacaat cgtaaaggca gtaaaaatag
3481 ggttaaatct cgttggagac aagatccatc acttttgtgc cataacataa accactgatt
3541 atcataattt ttaacccaaa ttcgaactaa gttatcagaa ttatctatta cgtgcatgca
3601 gagtttaata ggatatacag cttcatgaaa ctcaatatct gcaaaataga aaatacaatc
3661 tttttaaaaa gagaactata cttttgacaa aatcttatct attaatgcaa attttacata
3721 ctaataaaat ttgtattcat attgtatttg ccaatccaat tcaaaaattg gcaatcaatt
3781 aagttcagtt ctacttcgtc tgatcttgat tcataagcag tctacaatta aaatatatca
3841 gttaacttaa aagttacaaa ttgcggtgtt aaatattaca gaataaagta gtggaaaggt
3901 agaatgtgat taaatagata ggttatacaa tgtgttataa ttgtagtcag taacatacct
3961 catcaaacgg ctgacaagaa ttgtcataat ttgtatattt ctcaggtggt ccaattatgt
4021 tatcaaaaca agatgtgtta cgattatccc attggtaaaa aaatttattt tttacaaatt
4081 gataaacaaa atccgtttta taatcgtcct ctcctacaga tattttgtca atgtagggat
4141 atttattagc attctcataa taaaaaagaa cacctgaatg aagaatgtgg ccgttgccat
4201 atttttttct ctaaaagaaa atgaaacgct ttcattaaaa aaaaaaatcc ttttcacaaa
4261 aattacaaat ttcgaagcaa aatatggtat gtatgtacat ccgagactgt agcttgcgtg
4321 cagcagatag ctgcggatta tgtgaaaaaa cacataaagt ttgtttgttt tttttttttt
4381 ttcaataaat atataattta ttaaatgcaa tgtgatgaaa tggtgtaaca atagaggggc
4441 gggcgaaacg gcgaccgtta atgatcgccg cgaaggcgga caagagataa tacgccaccc
4501 ccgcccgacg cccccccgga gatcggaaat atagataaaa tattttcgtt attatttaca
4561 atattagtcg aacgttagtc aataaataat aaacagtggc ataatccctt tatttaatat
4621 aatttaa
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