LOCUS LJ648816 1747 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69051.graph_c1_seq50.
ACCESSION LJ648816
VERSION LJ648816.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1747)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1747
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69051.graph_c1_seq50"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 646 a 226 c 220 g 655 t
ORIGIN
1 tttttttttt tttttaacat ttatgcatgt atatttacaa gaattcatta tacattagat
61 agaaaataga taaatatttg ctctgtgcaa aatagataaa agtaaagaaa ctgatgaaaa
121 aattttcatt atagtataca tgtgtaaaca agcgtaatcc atttcaagat tacattaaat
181 tatgaaattt ttatagagat aatactatga aaagattttt catttaaaca cgaccttttt
241 taagttaaat tgtatataag gatttatttt atcttgtaat ttctctttcg atttattttc
301 aaaaatagat atgttctatg attttgtaga ataagtatag ttctttttct taattttcca
361 caatgataca tgtctaaata aaatttggaa ttactctaat caaagaaatt ctttttcagc
421 caaaccggaa gaaggtacgc cactagcaaa agaaacgatc gattacaacg agagatttcc
481 ctggacatgg gaccaaggca taatcggatt tggaccctat ggtaattccc acacagcacg
541 taatattgtt gtgatatcac agtaatatca ctttttcatt gcaatattat aacaaaatac
601 cagaaatgtc actgaaatat ttctgtgata tcacagtaat ctcaaaatgt ccgcgaaaac
661 gcatgtcaat aatattactg caatattata caatatttct gtgatattta actaatattg
721 caaggaatta aataaataaa ttatttttta tttctttttt tttattttat tgttattctt
781 aacattattt taaaaattat tgcatgtaat attagacaca gaaaaaaata acattgatat
841 aattaattaa agcaataagt aatattacaa actaaaaagt tataaactgt ttaccaatag
901 tgactttttt cgaacactgc catttaaggg ataaactaag taaatatcta aactaataat
961 aaagttgata aattcttttt cttaactttc actttcattc ctcgaaaggg caaggacatt
1021 attattttat ttttaaattg atttcttcta taggataccg aaattaccaa gaatattaag
1081 gatactaaaa atatcgaaat taatcaaaga gatagtgacg ttgcattaat aagacataat
1141 aaaaacgtgg tttgacatta ccttgttctt tgaaattaaa tattgcaaca atatattgca
1201 atgatatcat tggaatattt taatgttatt atcactgtgt aatatcacaa taatatttct
1261 gtgatatttc tgtgatatca gtggaatatt tcaatgtcat tatcactgtg taatatcaca
1321 gtaatatttc tgtgatattt cacagtaata tgtaatattt ctgtgatatt gcaatgattc
1381 tgtgatatca cagaaatatt acgtgctatg tgggtgtctt tctttgtctt cgatgtttaa
1441 tctgattacg tgtgttcagc tctaattatg aaaactttgc tttgcagtac aacaaaacac
1501 acaaaaaatg cttatatccg cttggtaagt tgttccaaga catttttact ttttactttt
1561 ttctatttgt atgttcattt gaagcaaaaa acacatgttt gaggttatga agtatttcct
1621 acatacacaa acaaaaatgt ttctttggat ttaataaatg ttgaaataaa agaaaaatta
1681 ttagaatagt tcaaccaaac taatgtttaa attaacaaat gcaattgttt gacattcaaa
1741 acacaca
//