LOCUS LJ648782 1161 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69051.graph_c1_seq16.
ACCESSION LJ648782
VERSION LJ648782.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1161)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1161
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69051.graph_c1_seq16"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 409 a 162 c 165 g 425 t
ORIGIN
1 gcacgtaata ttgcagtgat atcacagcaa tatcactttt attgcaatat tacatcaaaa
61 tacaccagaa atattactga tatcacagta gtatcaaaat gtttgcgaaa acttatcaaa
121 gtaacattac tgtgatatta tacaatattt ctatgatgtt tatgtgatat ttatataata
181 ttgcaaggaa ttaaataaat aaattatttt ttatttcttt ttttttattt tattgttatt
241 cttaacatta ttttaaaaat tattgcatgt aatattagac acagaaaaaa ataacattga
301 tataattaat taaagcaata agtaatatta caaactaaaa agttataaac tgtttaccaa
361 tagtgacttt tttcgaacac tgccatttaa gggataaact aagtaaatat ctaaactaat
421 aataaagttg ataaattctt tttcttaact ttcactttca ttcctcgaaa gggcaaggac
481 attattattt tatttttaaa ttgatttctt ctataggata ccgaaattac caagaatatt
541 aaggatacta aaaatatcga aattaatcaa agagatagtg acgttgcatt aataagacat
601 aataaaaacg tggtttgaca ttaccttgtt ctttgaaatt aaatattgca acaatatatt
661 gcaatgatat cattggaata ttttaatgtt attatcactg tgtaatatca caataatatt
721 tctgtgatat ttctgtgata tcagtggaat atttcaatgt cattatcact gtgtaatatc
781 acagtaatat ttctgtgata ttgcaatgat tctgtgatat cacagaaata ttacgtgcta
841 tgtgggttat aagacttatg tagcgagtag gtctacatta atgctataat atttcagttg
901 tcatttttgt atttttcaat caatcggcag gtcatttctt cgtcaaattc cggatagatg
961 atcgctttaa aattttgtat aatcccacag aagttcatta atatcccagt cagccaataa
1021 agagtggagt accaaagtgt tggcatgctg gtcacgtcca tattgtttat ttgaacgaga
1081 gctatcatag cgtagttgga caactcgata cctttcggca tccccgtggt tcccgaggaa
1141 tgcaaaatac acgctgtctg c
//