LOCUS LJ648000 1829 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68298.graph_c1_seq1.
ACCESSION LJ648000
VERSION LJ648000.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1829)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1829
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68298.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 618 a 300 c 340 g 571 t
ORIGIN
1 gacttcacgt gagagacgag agagctggag caagccggag tcgccgaaaa gtgaggggga
61 ggctcgactg tgggctcgac tcgcaaaacg ggttccttaa ttgcgcacta ctcctcctac
121 gttcaatggt tcaatcgagg caaacacgca tatatccacg atgcacgcgt gtgtgaagtg
181 tgggagtcgt gggagaataa aaggaaaaaa accgatgtca tgaggcctgc tttgctcact
241 tgaactgcgc gttgcatttt ctgcgctcaa aacgaagcgg gagtgtgaag agaaaagagg
301 aaggggaggg cagagatgaa ggagccagaa agttcagccg cgagaaatcc cttccacgca
361 cctcgtaaaa tatcctcctt cacaaaggag aaaggtgaat ccacgtgttc cgaagtttga
421 agcatgacgt aaccatgatc caaatttcga acgcagacaa attcaatcta tggacattcc
481 tgcgcatcag tgaatcgcga taaacgggga aacacgtacg ctgatataat gtgctcattg
541 gaaatttgat aagtaattta tatgcgattt tgattaattc cgtgttaaac gtacatcgcg
601 cagaggaacg cgattatgaa agggaaacat gtggtgggag gatcctccaa cgatgcacca
661 atgacgctgt aatgcggcca acttcacggt gcatgacatg cgtgacaaac agttcacgtg
721 gaattttcct tgtaacaacg aaaacataaa tgatatttat ataaatgact ttggtttgat
781 caaaataatt tcttttaaat aaaactttac gatatctcga ccgtttaaat atatgagaat
841 ctctttcgct gggtgtagat aaataattgc taatgagata aaaaaaagtg taataattaa
901 atattaacta agctaaataa caatgttaat aacaattttt tcttaatttt tttagattat
961 atcaggacca ttttttcaaa ataaaactac acatttttac ataaatcagt ttttgtcaat
1021 gttttgttgc gtgtagataa aataattaat tgctgatagg aaaatattaa taattgttaa
1081 gctaaataat agtacaaaaa caatttttta cgtaaattga tttctttcaa ggtattctac
1141 atatttttca tcataatgaa taaatatcga attggtaaca agagattttc ataattacgc
1201 gtacgtagtt cgatattttt atttggaatg agtgtaccta atgtttatct gaatattttt
1261 gtgtattgca atttataatt cattattcta aggcatgtga tatatatgta tatctgtgtg
1321 tcattataat gacatgttgt aacacctctt gacgtaaaca tatatcgatg cggttatcat
1381 tcgaccgcgt tccaatccct atttaattta tgtgcagtta tgtcttgcaa cctgtaatca
1441 atctttccga ggtagctcgg aacgcacgcg atcggatttt gcgggaatta cagccgattt
1501 caccagcttt cccttgaatt agataatgtc cgttaaattc gcgattaaag gacattatct
1561 aattcaaagg aaagattgat tgaaagctct ttaaacacac aacttccctg tttcaaatat
1621 aacatattta acaacagata attgtactat ctggaacata tcgcatctgt agagatcttt
1681 aatttcgttt ctctaaacaa gagaaaatct tcgaaacttt tttatttttt actatacttt
1741 tgttaactta aaaattaata attttatttt gtattttaaa aaaatatata ataaaagatt
1801 ttatcaattg caaaaaaaaa aaaaaaaaa
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