LOCUS LJ647998 3257 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68298.graph_c0_seq5.
ACCESSION LJ647998
VERSION LJ647998.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3257)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3257
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68298.graph_c0_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1038 a 539 c 648 g 1032 t
ORIGIN
1 ggcgtgtggt gctagcttgt agcgcgatgg ctgacgaaac aacgagggat accttgctgt
61 gccgcgtaaa agagcaaggc gagatagtgc gacgactgaa agccgcgaag gctgataaca
121 cgcagatagc agaggaagtc gccaagttgc tggagctgaa ggcacaattg ggggaggaga
181 atggttgtcc tcataaactc atcctcaaaa cgccaaaagg cacgagggat tataatccag
241 agcaaatggc actgcgattg ggagtgttgg agaaaataat atcagtattc aagcgtcacg
301 gcgccgagac gatagatacg cctgtatttg agctaaaaga tgtcttaact ggtaaatatg
361 gtgaagactc gaagcttatt tatgatctaa aagaccaagg tggtgagatt ctcgcactta
421 gatatgattt gacagttcct ttcgcgaggt atctggccat gaacaaaatt tcttccatca
481 agagatatca cattgccaag gtttatcgaa gagataaccc agctacaacg aaaggcagat
541 atagagaatt ttatcaatgt gatttcgaca ttgctggtca gtacgatccg atgctaccag
601 atgtagaatg catcaaggtt gtatgcgaag cgttagaagc tctgaatctg ggatcatact
661 taattaaggt gaatcatagg tctctgctgg atggcatatt cgctgcatgc ggcgtaccac
721 agagtaaatt ccgcagtatc tgttccgccg tggataagct ggacaaaagt ccgtgggaag
781 aagtaaagaa ggagatgata gacgaaaagg gattggatga tcatattgct gataaagtcg
841 gcaagtacgt cttgcaatcc ggtggagtgg aactaatagc agagttgaga aaagacaaag
901 agctgatgaa acagactgtt gccgtacaag gtttagactc catagaactg ttgctgaagt
961 actgtggcat ctacaaaatt cttgacaaaa ttaagtttga tttgagtctc gcaagaggac
1021 tcgattacta cacaggtgtt atttacgaag ctatattgtg tggagacaat atcggtgttg
1081 gtagcgtggc aggcggcggc cgttatgata atttagtagg aatgttcgac agcaagaaca
1141 aaatggtacc ctgtgtcggc gtgtcattgg gtgtagagcg aatattcagt gttatggagg
1201 caaaactggc gaataaaggc ctaaaaacgc gcgctgctga gatcgaagtg ttcgtggcga
1261 gcgcgcagaa aaatctgcat gaggagagaa tgaagatact ggcggatctg tgggaggcag
1321 gcgtgaaagc ggaacaatcc tacaagaaaa atgccaaact cttggcacag ttgcaacact
1381 gcgaggaaaa tggcattccg ttggcgataa tcgtcggcga aggcgagctg gcgcagggtg
1441 aagttacact gagagtcgtc tcgacgcggg agcagactcg tgtgccacgt agcaatctca
1501 ttgaggaaat acgaaggcag ctaaaaacgt cgtagcacca cttcttgtat aagtttcttt
1561 tgctgtcgga gatttacatc agtacaagaa actctttata ttgcatttag taccatttcg
1621 attcgcgctg gggagagaga aaagtttatt tatttttttc tttatgaatt tatttgtatg
1681 tacttcgtac aacatactaa acgaaatgac cgtgaaaaac tttttgtcac cgatagatgc
1741 taattaaagt tgtacaataa atgaatgcac gaggaagtgt aacgatgccc tacatttacc
1801 aagtgcaaca tagacaattt ccaggtggaa tcctttatat ataactaaat ttctccggat
1861 gaaatctggt attttagcag attaatttaa ctggtaataa ttcatagctt caagctacca
1921 ctcgagaaac caaatacatc tttataattt attctgcaaa agaatttaac aataaaatat
1981 tatataaatt tcgtagaaca tgtttcgttc cttcctttac tattgatttc aagagaaata
2041 tgatcacacg agtgactaca atataaataa atgtccaagt tacaagatcg ctgacagtat
2101 ttaaaatata aaatattaat ctgcatatta tttcgattat ttaacgtaat ttaggtccta
2161 aaaacttaat aataaattct tgaattaatc ggactttaat actctagatt taaaagaaaa
2221 tttttttact tttcattatt tattaacaaa aaattttctt gtctaactat ctgtttataa
2281 tatctatttt ctaatatctg ttttctaagt aatttgtttc actagttttg tgaaattgag
2341 gatagacata atatatgctt tatttattat atcacagtct tgtctaagtt taaattaaaa
2401 cttaataata tgcatatttt ataatttact tacatttcta ataattatca ttaacgttat
2461 attaatgtta cttcataaaa tgtacatttg tcttgaaaaa tgctataaat ccgactagtt
2521 tgaaaagttg gatttacgta tattgatgaa acttttcaca aagcttgtca ctctgttgtt
2581 aaattacatc tttccttata ctgtataaaa tttatatttt ctatctacat tcttttaata
2641 aattacctaa cattttgaaa caagacacga atttgttaat tactactagt aaaaagtttt
2701 caaactaaca tatgtaggat aggattattt cttgcacacg taatagcaag ctacaaatcc
2761 ttaattgaca agatttccga tttcataagt tattttttgc agtaaataca aaaaatcatt
2821 tttcctgtat ttatgtagtc atttttttaa caaaactatc aattatgttt aaaaaatgac
2881 gtttatctgt taattttaaa aaatatttag atatttttgt taacaaaact tgacgtcaaa
2941 tttttctgct ttttaaaatt aaacaacatt atactctttc ttaattgata aactctccgt
3001 atagtacgat tatgaatttt cctttttatt tgtcaggttt ctcaacttta atttccttca
3061 agtccgcatc ctcttccttt ccagcagctc tcgtcatagc tctgtactgt tcaaatggat
3121 tgatcgtcgg cttttctatc gtctcttgca atggtggctt gtacgagttt attgacacgc
3181 tgggtttgtg ctttctcgac tctggggaac ttgtgctgct tgttaaagta tctaaattat
3241 caattacaca tatgtgt
//